Items where Subject is "TA164 Bioengineering"

A

Abdelgany Hamed, Ahmed Mohamed Elghareb (2010) Molecular and morphophysiological approaches for a better understanding of drought resistance mechanisms in some wheat genotypes. [Thesis]

Açıksöz Özden, Seher Bahar (2012) Role of nitrogen nutrition in biofortification of durum wheat with iron. [Thesis]

Afghah, Seyedeh Ferdows and Ullah, Mohib and Zanjani, Jamal Seyyed Monfared and Süt, Pınar Akkuş and Şen, Özlem and Emanet, Melis and Saner Okan, Burcu and Çulha, Mustafa and Menceloğlu, Yusuf Z. and Yıldız, Mehmet and Koç, Bahattin (2020) 3D printing of silver-doped polycaprolactone-poly(propylene succinate) composite scaffolds for skin tissue engineering. Biomedical Materials, 15 (3). ISSN 1748-6041 (Print) 1748-605X (Online)

Akçay, İzzet Mehmet (2010) Transcriptional regulation of IL-7R alpha gene in T lymphocytes. [Thesis]

Akhmedov, Murodzhon and Çatay, Bülent and Apaydın, Serkan Mehmet (2015) Automating unambiguous NOE data usage in NVR for NMR protein structure-based assignments. Journal of Bioinformatics and Computational Biology, 13 (6). ISSN 0219-7200 (Print) 1757-6334 (Online)

Akköse, Ümit (2023) The Relationship Between 3d Genome Organization And Uv-Induced Dna Damage And Repair. [Thesis]

Akpınar, Bala Anı (2015) Next-generation sequencing and physical mapping of wheat chromosome 5D and comparison with its wild progenitor. [Thesis]

Aktay, Öznur (2018) Identifying regulation of CANT1 during endoplasmic reticulum stress-induced cell death. [Thesis]

Aktürk, Anıl (2012) Characterization of A. thaliana G-Protein gamma subunit (AGG2) and investigation of DTT effect on its oligomeric state. [Thesis]

Akülkü, İrem (2021) Mapping the distribution of the octopamine beta receptor subtype-2 in the honeybee (apis mellifera) brain. [Thesis]

Al-Khodor, Jana (2022) Third-generation sequencing technology to define microbial diversity in wheat cultivated soils in Turkey. [Thesis]

Al-Murtadha, Asma Abdullah Abdulwahab (2015) Microscopic analysis of aneuploidy induced by the mutation of the CCDC124 gene. [Thesis]

Albayrak, Aydın (2011) Classification of proteins using sequential and structural features. [Thesis]

Altay, Halit Yusuf (2023) A novel approach for crispr-dcas9-mediated neuroprotective gene therapies for inherited retinal diseases. [Thesis]

Altıntaş, Ayşegul (2010) Effects of glyphosate on brachypodium distachyon. [Thesis]

Altıntaş, Gamze (2011) Characterization of zinc uptake, translocation and remobilization in hydroponically grown triticum turgidum L. subsp. durum desf. and triticum turgidum L. subsp. dicoccoides genotypes. [Thesis]

Altıntaş, Zeynep (2012) Development of nanoparticle-modified sensor platform for cancer marker detection. [Thesis]

Altınuşak, Tuğçe (2014) Catastrophic evolution of trimethoprim resistance. [Thesis]

Altun, Hamza Yusuf (2020) Shedding new light on intracellular signaling pathways-establishing live-cell fluorescence imaging techniques using genetically encoded fluorescent biosensors. [Thesis]

Aras, Mertkaya (2022) Genetically modified antigen specific NK cells. [Thesis]

Arısan, Elif Damla (2009) Molecular mechanism of drug induced apoptosis and chemoresistance in estrogen receptor alpha +/- breast cancer cell lines: mcf-7 and mda-mb-231. [Thesis]

Asif, Muhammad (2017) Effects of major global climate change components on nutritional physiology and biofortification of wheat. [Thesis]

Aslanov, Jeyhun and Çatay, Bülent and Apaydın, Serkan Mehmet (2013) An ant colony optimization approach for solving the nuclear magnetic resonance structure based assignment problem. In: 15th Genetic and Evolutionary Computation Conference (GECCO 2013), Amsterdam, The Netherlands

Ata, Büşra Nur (2022) Live cell imaging of redox mediated nrf2 activity using transcription factor based biosensors and chemogenetic tools. [Thesis]

Ateş, Yıldız Özlem (2009) Effect of reactive oxygen species in cisplatin-induced apoptotic response of hct 116 colon carcinoma cells. [Thesis]

Avşar, Bihter (2017) Investigation of structural properties of heterotrimeric G-Proteins γ subunits in plants. [Thesis]

Aydın, Mehmet Serhat and Bilgili, Hatice Kübra and Kızıltaş, Güllü and Emanet, Melis and Özaydın İnce, Gözde (2021) Fabrication and analysis of surface functionalized porous pcl-nha scaffolds with p(hema-co-egdma) hydrogel via icvd and bmp-2 release simulation. In: ASME 2020 International Mechanical Engineering Congress and Exposition (IMECE 2020), Virtual, Online

Aydın, Mert (2011) Biochemical and biophysical characterization of mutant T. durum metallothionein. [Thesis]

Azgari, Cem (2020) Genome-wide effects of DNA replication on nucleotide excision repair of UV-Induced DNA lesions. [Thesis]

B

Bakar, Mine (2010) Construction of plant gene expression vectors carrying ath-Mir393a gene and its target gene AFB3. [Thesis]

Bakır, Burcu (2012) Bioinformatics approaches to associate single nucleotide polymorphisms with human diseases according to their pathway related context. [Thesis]

Bakırcı, Ezgi and Toprakhisar, Burak and Zeybek, Mehmet Can and Özaydın İnce, Gözde and Koç, Bahattin (2017) Cell sheet based bioink for 3D bioprinting applications. Biofabrication, 9 (2). ISSN 1758-5082 (Print) 1758-5090 (Online)

Barakat, Sarah Mohammed Mohammed (2022) Isolation and characterization of nanobodies that bind the btb domain of patz1 transcription factor. [Thesis]

Bayram Akçapınar, Günseli (2011) Protein engineering and covalent modification of trichoderma reesei cellulases in pichia pastoris for textile biofinishing. [Thesis]

Bedir, Seden (2020) Functional analysis of a novel mutation in the CD70 gene leading to primary immunodeficiency disease. [Thesis]

Belkaya, Serkan (2009) Identification of the interacting protein partners of the ThPOK transcription factor. [Thesis]

Biçen, Ozan and Lehtomaki, Janne J. and Akyıldız, Ian F. (2020) Statistical modeling and bit error rate analysis for bio-sensor receivers in molecular communication. IEEE Sensors Journal, 20 (1). pp. 261-268. ISSN 1530-437X (Print) 1558-1748 (Online)

Bilge, İpek (2020) Identification of powdery mildew disease and genetic improvements in hazelnut. [Thesis]

Bilgili, Hatice Kübra and Özaydın İnce, Gözde and Emanet, Melis and Kızıltaş, Güllü (2021) Fabrication of 3D bone scaffolds functionalized with spatiotemporal release of BMP-2 growth factor via iCVD to enhance osteoregeneration. In: ASME 2020 International Mechanical Engineering Congress and Exposition (IMECE 2020), Virtual, Online

Bulut, Reyyan Fatima (2016) Genome-wide microRNA identification in drought tolerant wild emmer wheat: assesment of antimicrobial activity of surface active antimic agent on raw fruit and vegetable packaging. [Thesis]

C

Canpolat, Baran (2015) Covalent modification of cellulases for textile biofinishing. [Thesis]

Carlier, Aurelli and Akdeniz Skvortsov, Gözde and Hafezi, Forough and Ferraris, Eleonora and Patterson, Jennifer and Koç, Bahattin and Oosterwyck, Hans Van (2016) Computational model-informed design and bioprinting of cell-patterned constructs for bone tissue engineering. Biofabrication, 8 (2). ISSN 1758-5082 (Print) 1758-5090 (Online)

Cebeci Yalçınkaya, Özge (2010) Molecular analysis of glyphosate and osmotic stress responsive genes. [Thesis]

Ceylan, Yasemin (2015) Changes in growth and magnesium concentration of wheat and coffee plants grown under various magnesium and water stress treatments. [Thesis]

Cin, Ayşe Nur (2021) Identifying characteristic properties and antioxidant effect of quercetin loaded titanium dioxide nanoparticles. [Thesis]

D

Deniz, Emre (2014) The role of PATZ1 transcription factor in the DNA damage response. [Thesis]

Dinçer, Sedef (2010) Aspergillus niger as an expression system for heterologous expression of ROL and BTL2. [Thesis]

Doğan, Esen (2010) Cloning and characterization of a novel abscisic acid (aba)-induced hva22-like protein from triticum turgidum spp. dicoccoides in response to drought stress. [Thesis]

Durası, İlknur Melis (2018) Identification of miRNA regulatory pathways in complex diseases. [Thesis]

Durmaz, Emel (2012) Protein engineering studies on bacillus thermocatenulatus lipase. [Thesis]

E

Ekmen, Erhan (2021) Discovery of amino acid compositions and motifs responsible for topological transitions in protein complexes. [Thesis]

Elitaş, Meltem and Zeinali, Soheila (2016) Modeling and simulation of EGF-CSF-1 pathway to investigate Glioma - Macrophage interaction in brain tumors. International Journal of Cancer Studies & Research (IJCR): Special Issue On "Advances in Brain Cancer Research", 5 . pp. 1-8. ISSN 2167-9118

Ergüner, Bekir (2017) Computational methods for analyzing ngs data to discover clinically relevant mutations. [Thesis]

Ertem, İdil (2022) Effects of root mycorrhizal colonization and varied phosphorous supply on cadmium accumulation in rice plants. [Thesis]

Eyüpoğlu, Alp Ertunga (2019) Investigating the role of coiled-coil domain containing 124 (CCDC124) in innate antiviral immune response. [Thesis]

G

Gezen, Melike (2022) Identification of the targets of the human transcription factor patz1. [Thesis]

Ghanem, Saleh Bader Saleh (2021) Determining which octopamine receptor links appetite and fluctuating trehalose levels in the honey bee. [Thesis]

Güçlü, Tandaç Fürkan (2021) Molecular level understanding of the functionality of PDZ3 variants via advanced all-atom simulations and dynamic residue network analyses. [Thesis]

Gül, Özgür (2010) Protein engineering of rhizopus oryzae lipase for improved thermostability. [Thesis]

Günal, Gamze (2009) Molecular biological investigation of interleukin-7 receptor gene expression in t lymphocytes. [Thesis]

Güvenek, Ayşegül (2014) A systematic study for evolution of bacterial drug resistance: phenotype to genotype. [Thesis]

H

Hakanoğlu, Haşim (2022) Identification of potential transcriptomic biomarkers for varroa resistance in honey bees (apis mellifera anatoliaca). [Thesis]

Hussain, Babar (2018) Genetic and genomic architecture of salt tolerance in bread wheat. [Thesis]

J

Jalalypour, Farzaneh (2020) Developing New Applications for Perturbation Response Scanning Method to Study Conformational Modulation of Globular Proteins. [Thesis]

K

Kahraman, Kadriye (2014) Effects of varied magnesium and potassium nutrition on wheat grown under ambient and elevated atmospheric carbon dioxide conditions. [Thesis]

Kahraman, Kadriye (2020) Hazelnut genome and transcriptome analysis under biotic and abiotic stress. [Thesis]

Kale, Sameer and Khani, Navid and Nadernezhad, Ali and Koç, Bahattin (2017) Modeling and additive manufacturing of biomimetic heterogeneous Scaffold. In: 3rd CIRP Conference on BioManufacturing, Chicago, USA

Kaleli, Hümeyra Nur (2019) Investigation of novel PKC targets in the regulation of autophagy. [Thesis]

Kantar, Melda (2015) Diversity of microRNAs and genes towards development of drought tolerant wheat. [Thesis]

Kaplan Türköz, Burcu (2009) Structural investigation of g-protein signaling in plants. [Thesis]

Karaboğa, Enes (2014) S-Pyocins as potential antimicrobial agents for eradicating pseudomonas aeruginosa biofilms. [Thesis]

Karaca, Esra (2008) Role of aven in apoptotic response following paclitaxel and docetaxel treatment in mda-mb231 breast cancer cells. [Thesis]

Karakaş, Bahriye (2017) Exploring the effects of mitochondrial estrogen receptors on mitochondrial priming and endocrine therapy response in breast cancer cells. [Thesis]

Karataş, Sevde Nur (2018) Designing selective small molecule inhibitor screening through BH3 profiling. [Thesis]

Karslı, Gizem (2008) Possible anticancer effects of pmc-a through the mechanisms of mitochondrial apoptosis and cell cycle arrest in colon carcinoma cell lines; hct116 wt and bax (-/-). [Thesis]

Kaya, Sezgi (2023) Genome-Wide Uv-Induced Dna Damage And Nucleotide Excision Repair In The Context Of R-Loops. [Thesis]

Kaya, Veysel Oğulcan (2020) In silico analysis of coding single-nucleotide polymorphism (SNP)'s in glucocerebrosidase (GBA) gene and their impact on the biological functions of the cell. [Thesis]

Kaymak, Ebru (2008) Arabidopsis thaliana lipases: cloning and expression in pichia pastoris. [Thesis]

Kesim, Hale (2021) Investigation of molecular mechanisms of lipid droplets catabolic pathways and their interactions in ichthyosis disease. [Thesis]

Keskin, Nazlı (2014) Identification of PATZ1 transcription factor as a novel interacting partner and regulator of the p53 tumor suppressor protein. [Thesis]

Keskin, Nazlı (2010) The role of CD3 delta and Rag1Ap1 proteins in T cell receptor expression. [Thesis]

Khalid, Zoya (2017) Computational approaches to study drug resistance mechanisms. [Thesis]

Khan, Zaeema (2018) Brachypodium distachyon seedling growth visualization under osmotic stress and overexpression of MIR7757 to increase drought tolerance. [Thesis]

Khani, Navid and Nadernezhad, Ali and Bartolo, Paulo and Koç, Bahattin (2017) Hierarchical and spatial modeling and bio-additive manufacturing of multi-material constructs. CIRP Annals - Manufacturing Technology, 66 (1). pp. 229-232. ISSN 0007-8506 (Print) 1726-0604 (Online)

Kısaayak Çollak, Filiz (2009) Cloning expression and purification of durum wheat metallothionein domains and structural modelling. [Thesis]

Kısakürek, Ali Fuat (2011) 2-Deoxyglucose pretreatment sensitizes colon cancer cells to cisplatin and killer trail induced apoptosis by Mcl-1 downregulation. [Thesis]

Kıvrak, Büşra Elif (2023) Crispr-Cas9 Knockdown Of Octopamine Beta Receptor Subtype 2 To Understand Its Role In Honey Bee Appetite Regulation. [Thesis]

Kmail, Abdalsalam Omer Mohammed (2009) Nuclear translocation of nfat family proteins in human reporter cell lines. [Thesis]

Kocatuğ, Nazlı (2018) Computational assessment of the effect of allosteric mutations on the dynamics of PDZ domains. [Thesis]

Kocatürk, Nur Mehpare (2018) Cross-link between the ubiquitin-proteasome system (UPS) and autophagy in the regulation of mitophagy. [Thesis]

Koçak, Muhammed (2018) Development of protein-conjugated spion-based theranostic nanoparticles as small rna gene therapy vehicles in cancer treatment. [Thesis]

Köse, Hazal Büşra (2014) Expression and purification of arabidopsis thaliana heterotrimeric G protein alpha subunit (GPA1) using bacteria and yeast systems. [Thesis]

Kuş, Eda (2023) Functional Neurons From Human Bone Marrow Derived Mesenchymal Stem Cells. [Thesis]

Kutman, Barış Ümit (2010) Roles of nitrogen and zinc nutrition in biofortification of wheat grain. [Thesis]

Küçükural, Alper (2008) Novel techniques for protein structure characterization using graph representation of proteins. [Thesis]

L

Levent, Elif (2010) The role of bax in pmc-f induced cell death mechanism in HCT116 colon carcinoma cell lines. [Thesis]

Liv, Nalan (2009) An implementation of functionalized carbon nanotubes on optical biosensors. [Thesis]

M

Mahmoud, Amer Faiz Ahmed (2010) Molecular and biological investigations of damping-off and charcoal-rot diseases in sunflower. [Thesis]

Mehmetoglu, Tuğba (2010) Genomic and proteomic analysis of chemoresistance in breast cancer cell lines: MCF-7 and MDA-MB-231. [Thesis]

Mengütay, Melis (2014) Adequate magnesium nutrition mitigates adverse effects of heat and high light stress on maize and wheat. [Thesis]

Meydan, Cem (2013) Discovering discriminative and class-specific sequence and structural motifs in proteins. [Thesis]

Mollamehmetoğlu, Elif (2013) Cloning and expression of beta subunit (AGB1) of heterotrimeric g-protein complex A.thaliana. [Thesis]

Muslu Ufuk, Tuğdem (2021) Plant noncoding RNAS and comparative analysis of insect tolerance loci. [Thesis]

Musul, Biran (2018) The role of tumor stroma and cancer associated fibroblasts in tumor growth through cytokines. [Thesis]

N

Nadernezhad, Ali and Khani, Navid and Koç, Bahattin (2017) Biomanufacturing of heterogeneous hydrogel structures with patterned electrically conductive regions. In: 3rd CIRP Conference on BioManufacturing, Chicago, USA

Noğay, Liyne (2019) An interaction matrix of BTB domain-containing transcription factors. [Thesis]

O

Onat, Ayda (2008) Effects of Istanbul metropolitan municipality compost product on plant growth, mineral nutrients and heavy metals in plant and soil. [Thesis]

Oruç, Tuğçe (2016) Lipid bilayer permeation of an aliphatic amine drug: modeling with molecular dynamics simulations and kinetic rate equations. [Thesis]

Ova, Emir Ali (2013) Adverse effect of high phosphorus on plant zinc concentration expressed differently in wheat plants grown in soil and nutrient solution. [Thesis]

P

Pamukcu, Cevriye (2021) Development of a pseudovirus-based assay for analysis of neutralizing activity against SARS-CoV-2. [Thesis]

Parlar, Ayhan (2017) A novel approach in cancer immunotherapy: natural killer cells expressing T cell receptors. [Thesis]

Parlar, Ayhan (2021) Characterization of structural and functional properties of anti-VEGF-IgG molecules under certain environmental stress conditions. [Thesis]

Peleg, Zvi and Çakmak, İsmail and Öztürk, Levent and Yazıcı, M. Atilla and Jun, Yan and Budak, Hikmet and Korol, Abraham B. and Fahima, Tzion and Saranga, Yehoshua (2009) Quantitative trait loci conferring grain mineral nutrient concentrations in durum wheat 3 wild emmer wheat RIL population. Theoretical and Applied Genetics, 119 (2). pp. 353-369. ISSN 0040-5752

Piepoli, Sofia (2020) Characterization of the PATZ1 BTB domain. [Thesis]

Q

Qabaha, Khaled Ibraheem Saleh (2010) Development and optimization of a microwave-assisted protein hydrolysis method to permit amino acid profiling of cultivated and wild wheats and to relate the amino acid to grain mineral concentrations. [Thesis]

R

Rehman, Raheela (2019) Uptake, transport and seed deposition of zinc in wheat and maize under varied zinc and nitrogen supply. [Thesis]

Roçi, Irena (2012) Toward anti-cancer drugs: selection of anti-VEGF and anti-HER2 aptamer to inhibit cancer biomarkers. [Thesis]

S

Sadeghi, Sahl (2017) Development of microfluidic cell growth and stress response analysis platforms at single cell resolution. [Thesis]

Saltukoğlu, Deniz (2008) Role of mapks in er stress-related cell cycle arrest and apoptosis. [Thesis]

Saner Okan, Burcu and Marset Castro, Azucena and Seyyed Monfared Zanjani, Jamal and Akkuş Sut, Pınar and Şen, Özlem and Çulha, Mustafa and Menceloğlu, Yusuf Z. (2016) Thermally exfoliated graphene oxide reinforced fluorinated pentablock poly(l-lactide-co-ε-caprolactone) electrospun scaffolds: Insight into antimicrobial activity and biodegradation. Journal of Applied Polymer Science, 133 (22). ISSN 0021-8995 (Print) 1097-4628 (Online)

Saraç, Aydan (2017) Mapping intracellular immune responses against lentiviral vectors in natural killer cells using genome scale crispr-knockout. [Thesis]

Sarıkaya, Sinem (2021) Investigation of links and crosstalk between autophagy and DNA damage responses. [Thesis]

Sarıyar, Sanem (2019) Exploring nanobodies interrupting the interaction between p53 and MDM4. [Thesis]

Saygı, Ceren (2010) Durum wheat metallothionein mutants and their biophysical characterization. [Thesis]

Sayitoğlu, Ece Canan (2017) Intracellular immunodynamics of lentiviral gene delivery in human natural killer cells. [Thesis]

Selçuk, Berkay (2022) Evolutionary identification of residues related to G protein coupling selectivity in aminergic GPCRs/. [Thesis]

Sevimli, Gülşah (2021) How much iron is good? Revisiting the role of ferrous iron supplementation in cultured cells using genetically encoded NO biosensors. [Thesis]

Shamloo, Bahar (2016) Characterization of the C-terminal domain of the P53 tumor suppressor. [Thesis]

Sırlı, Serkan (2014) Investigations on the n-linked glycosylation of the aspergillus niger lipase in pichia pastoris. [Thesis]

Soğutmaz Özdemir, Bahar (2009) Application of biotechnological tools to model plant: brachypodium distachyon. [Thesis]

Soliman Tolba, Yomna Soliman Mohammed (2023) Human Bone Marrow-Mesenchymal Stem Cells Differentiation Into Brain-Like Endothelial Cells|. [Thesis]

Soysal, Duygu (2014) The role of SIRT1 on the crosstalk of p65 and NFATS in U937 monocytes under hyperosmotic stress. [Thesis]

Su, Y. Senem and Öztürk, Levent and Çakmak, İsmail and Budak, Hikmet (2009) Turfgrass species response exposed to increasing rates of glyphosate application. European Journal of Agronomy, 31 (3 Sp. ). pp. 120-125. ISSN 1161-0301

T

Tabak, Ahmet Fatih and Yeşilyurt, Serhat (2010) Validated reduced order models for simulating trajectories of bio-inspired artificial micro-swimmers. In: 8th International Conference on Nanochannels, Microchannels and Minichannels - 3rd Joint US-European Fluids Engineering Summer Meeting and 8th International Conference on Microchannels and Minichannels (FEDSM2010-ICNMM2010), Montreal, Canada

Tamer, Yusuf Talha (2014) Studying genetic and enzymatic constraints driving evolution of antibiotic resistance. [Thesis]

Taşkıran, Hakan (2018) Screening of p53-MDM2 interaction inhibitors through genome editing, high-content screening, and surface plasmon resonance. [Thesis]

Tekdal, Dilek (2015) Studies on molecular and genetic characterization of the genes responsible for the multicarpellary gynoecium in thermopsis turcica. [Thesis]

Temiz, Şeyda Şaziye (2013) Generation of Xanthomonas derived TALE proteins that inhibit gene transcription. [Thesis]

Tezil, Tuğsan (2012) Probing the effect of IKK on FOXO3: a regulatory mechanism of apoptosis and autophagy in chemoresistance. [Thesis]

Timuçin, Ahmet Can (2015) Identification of SIRT1 as a novel regulator of NFAT5 dependent aldose reductase expression under osmatic stress. [Thesis]

Tolay, Nazife (2018) Generation of reporter cell lines by genome editing to probe p53 activity. [Thesis]

Toprakhisar, Burak (2016) Development of tendon derived natural extracellular matrix hydrogels for 3D bioprinting applications. [Thesis]

Tunç, Cevza Esin (2017) Changes in root morphology and nutrient uptake in wheat plants with varied potassium and magnesium supply. [Thesis]

Tütüncü, Yeşim (2022) Generation of a reporter-retinitis pigmentosa mouse model for retinal regeneration studies using crispr/dcas9-based artificial transcription factors. [Thesis]

U

Ullah, Naimat (2017) Comparative metabolite profiling of drought stress responsive biochemical pathways in root and leaves of triticeae species. [Thesis]

Usluer, Sinem (2019) Identification of immunological genes important for cytotoxicity. [Thesis]

Uysal, Ebru (2015) Impacts of single-walled carbon nanotubes on polymerase chain reaction. [Thesis]

Uzbaş, Fatma (2010) Trichoderma reesei as an expression system for homologous production of individual cellulases. [Thesis]

V

Vural, Sümeyra (2020) Method development and optimization for nucleic acid detection platforms. [Thesis]

Vuruşaner Aktaş, Beyza (2015) Survival signals induced by cholesterol oxidation by-products in atherosclerosis. [Thesis]

Y

Yalçın, Gülperi (2014) Genome editing of the IL-7 receptor gene locus using talens. [Thesis]

Yardımcı, Galip Gürkan (2007) Structural alignment using network properties. [Thesis]

Yavuz, Ahmet Sinan (2017) Predictive analysis of conditional epigenetic variability. [Thesis]

Yenenler, Aslı (2017) Protein engineering applications for functional enhancement of cellulase and lipase enzymes. [Thesis]

Yenilmez, Batuhan Orbay (2013) Generation of novel random mutagenesis lipase libraries via directed evolution. [Thesis]

Yeşil, Emel (2008) Genetic variation for salt and zinc defficiency tolerance in aegilops tauschii. [Thesis]

Yeşilırmak, Filiz (2008) Biophysical and functional characterization of wheat metallothionein at molecular level. [Thesis]

Yılancıoğlu, Kaan (2014) Genetic, physiological and biotechnological assessment of microorganisms for renewable and sustainable energy resource production. [Thesis]

Yılancıoğlu, Kaan (2008) Pramanicin-a induces apoptosis in hct116 colon carcinoma cells: activation of jnk, p38, erk1/2 and induction of oxidative stress. [Thesis]

Yıldız Kutman, Bahar (2013) The essential and beneficial roles of nickel In growth of soybean and wheat plants. [Thesis]

Yılmaz, Sinem (2008) Role of bcl-2 family members in 4-hne induced apoptosis. [Thesis]

Yozgat, Yasemin (2019) p53-Regulated hexokinase 1b is a novel target for metabolic theraphy against non-small-cell lung cancer. [Thesis]

Yükselen, Onur (2012) Combining in silico docking and molecular dynamics simulations to predict the impact of mutations on the substrate specificity of BTL2 lipase. [Thesis]

Z

Zahedimaram, Pegah (2022) The identification of the mechanisms of lrba deficiency dependent defects in regulatory t-cell function. [Thesis]

Zakharyuta, Anastasia (2015) Nanosized crosslinked protein aggregates (nano-CLPA). [Thesis]

Zarepour, Atefeh and Zarrabi, Ali and Larsen, Kim (2019) Fabricating β-cyclodextrin based pH-responsive nanotheranostics as a programmable polymeric nanocapsule for simultaneous diagnosis and therapy. (Accepted)

Ç

Çağırıcı, Halise Büşra (2019) Uncovering structural genomic contents of wheat. [Thesis]

Çakır, Hatice (2020) Analysis of the crosstalk between cancer-associated fibroblasts and tumor cells in hepatocellular carcinoma. [Thesis]

Çakmak, İsmail and Yazıcı, M. Atilla and Tutuş, Yusuf and Öztürk, Levent (2009) Glyphosate reduced seed and leaf concentrations of calcium, manganese, magnesium, and iron in non-glyphosate resistant soybean. European Journal of Agronomy, 31 (3 Sp. ). pp. 114-119. ISSN 1161-0301

Çalık, Aslı (2010) Optimization of the production of trichoderma reesei endoglucanase I in pichia pastoris. [Thesis]

Çapkın, Eda (2023) Revealing the Analytical Potential of FcγRIa (CD64) as a Ligand Molecule for IgG1 Capture and Antigen Sensing: Evaluation of FcγRIa ectodomain via Molecular Dynamics. [Thesis]

Çavuşlar, Gizem and Çatay, Bülent and Apaydın, Serkan Mehmet (2012) A tabu search approach for the NMR protein structure-based assignment problem. IEEE/ACM Transactions on Computational Biology and Bioinformatics, 9 (6). pp. 1621-1628. ISSN 1545-5963

Çelik, Elif (2019) A Systemic comparison of different chimeric antigen receptor (car) designs for retargeting of NK-92 cells against tumor antigens. [Thesis]

Çetin, Arda (2020) Epigenetic determinations of nucleotide excision repair efficiency. [Thesis]

Çetin, Ronay (2017) Targeting transcription factor binding sites of the interleukin 7 receptor gene using CRISPR/CAS9 genome editing. [Thesis]

Çetin Karayumak, Süheyla (2016) Modeling of tubular structures and fibers in in vivo data: revealing asymmetry in human vasculature and white matter fiber tracts. [Thesis]

Çevik, Şafak Işıl (2010) The role of CD3 delta interacting proteins in T-Cell receptor assembly and signaling. [Thesis]

Çiçek, Nilay (2023) Ultrasound stimulated hexagonal boron nitrides as cancer drug nanocarriers. [Thesis]

Çiftçi, Özgün Cem (2018) Investigation of gene transfer potential with classical hybridization in vuralia turcica and identification of rhizobacterial species contributing its development. [Thesis]

Çokluk, Zeynep (2021) Manipulating and visualizing the energy metabolism in single cells using chemogenetic tools and genetically encoded biosensors. [Thesis]

Çokol Çakmak, Melike (2016) Systematic screen of double and triple drug combinations against erwinia amylovora, the causative agent for fire blight. [Thesis]

Çolak, Ersoy (2016) Heterotrimeric g-protein alpha (α) subunit from A. thaliana (AtGPA1) forms trimeric structures in solution. [Thesis]

Ö

Öz, Tuğçe (2013) Investigating evolutionary trade-offs for designing novel strategies to slow down evolution of antibiotic resistance. [Thesis]

Özbolat, İbrahim T. and Koç, Bahattin (2011) A continues multi-material toolpath planning for tissue scaffolds with hollowed features. Computer-Aided Design and Applications, 8 (2). pp. 237-247. ISSN 1686-4360

Özbolat, İbrahim T. and Koç, Bahattin (2011) Multi-function based modeling of 3D heterogeneous wound scaffolds for improved wound healing. Computer-Aided Design & Applications, 8 (1). pp. 43-57. ISSN 1686-4360

Özbolat, İbrahim T. and Marchany, Michelle and Joseph, A. Gardella, Jr., and Koç, Bahattin (2013) Computer-aided 4D modeling of hydrolytic degradation in micropatterned bioresorbable membranes. Journal of Medical Devices, 7 (2). ISSN 1932-6181 (Print) 1932-619X (Online)

Özcan, Ahsen (2015) Modeling of the mechanism of the glucocorticoid resistance using CRISPR/Cas9 mediated genome editing. [Thesis]

Özdemir, Özge (2008) Accumulation of selenium in different wheat genotypes and its protective role against various abiotic stress factors. [Thesis]

Özer, Buğra (2016) Exploration of methylation-driven mechanisms in cancer. [Thesis]

Özkazanç Ünsal, Didem (2020) Development of a novel in vitro screening method using genetically modified NK-92 cells against various tumor cells. [Thesis]

Özle, Mert (2022) Manipulation of synaptic pruning via the ecdysone signaling pathway and its effects on complex learning. [Thesis]

Özler, Saime Burçe and Bakırcı, Ezgi and Küçükgül, Can and Koç, Bahattin (2016) Three-dimensional direct cell bioprinting for tissue engineering. Journal of Biomedical Materials Research Part B: Applied Biomaterials . ISSN 1552-4973 (Print) 1552-4981 (Online) Published Online First http://dx.doi.org/10.1002/jbm.b.33768

Özler, Saime Burçe and Küçükgül, Can and Koç, Bahattin (2015) 3-boyutlu biyobasım (3D bioprinting). Türkiye Klinikleri Tıbbi Onkoloji Özel Dergisi, 8 (2). pp. 155-161. ISSN 1308-1098 (Print) 2146-8567 (Online)

Özlü, Meral İlçim (2009) Identification of the interacting partners of CD3 delta. [Thesis]

Özoğul, Beyzanur (2023) Micro scale hydrodynamic cavitation for thrombolysis: a novel clot-on-a-chip platform. [Thesis]

Öztolan, Nihal (2009) Determination of antioxidant capacity of selenium-enriched wheat seeds. [Thesis]

Öztürk, Deniz Gülfem (2019) Mechanisms of autophagy control through micrornas under cellular stress. [Thesis]

Ü

Ükelgi, Nurten (2011) Isolation, identification and characterization of wine yeast species from grapes of three different vineyards in Turkey. [Thesis]

Ün, Manolya (2011) The role of BTB/zinc finger transcription factor Patz1/MAZR in the regulation of p53-mediated DNA damage response during T cell development. [Thesis]

İ

İnan, Asuman (2021) In silico analysis of the food allergy-related pathways and the potential role of dietary mirnas. [Thesis]

Ş

Şahin, Ebru (2013) Detecting motifs for computational classification of dockerin and cohesin sequences. [Thesis]

Şahin, Mervenaz and Tabak, Ahmet Fatih and Kızıltaş, Güllü (2022) Analysis of functionally graded and uniform scaffolds based on mechano-biology and cell diffusion. In: VPH 2022 Conference (Virtual Physiological Human): Digital Twins for Personalized Treatment Development and Clinical Trials, Porto, Portugal

Şahin, Mervenaz and Tabak, Ahmet Fatih and Kızıltaş, Güllü (2021) Initial study towards the integrated design of bone scaffolds based on cell diffusion, growth factor release and tissue regeneration. In: International Mechanical Engineering Congress & Exposition, Virtual Conference

Şutova, Hande Eda (2022) Development of a nanogel based topical drug formulation for the treatment of neovascular age-related macular degeneration (nAMD). [Thesis]