Subject: TA164 Bioengineering

Number of items at this level: 68.


Carlier, Aurelli and Akdeniz Skvortsov, Gözde and Hafezi, Forough and Ferraris, Eleonora and Patterson, Jennifer and Koç, Bahattin and Oosterwyck, Hans Van (2016) Computational model-informed design and bioprinting of cell-patterned constructs for bone tissue engineering. Biofabrication, 8 (2). ISSN 1758-5082 (Print) 1758-5090 (Online)

Elitaş, Meltem and Zeinali, Soheila (2016) Modeling and simulation of EGF-CSF-1 pathway to investigate Glioma - Macrophage interaction in brain tumors. International Journal of Cancer Studies & Research (IJCR): Special Issue On "Advances in Brain Cancer Research", 5 . pp. 1-8. ISSN 2167-9118

Özler, Saime Burçe and Bakırcı, Ezgi and Küçükgül, Can and Koç, Bahattin (2016) Three-dimensional direct cell bioprinting for tissue engineering. Journal of Biomedical Materials Research Part B: Applied Biomaterials . ISSN 1552-4973 (Print) 1552-4981 (Online) Published Online First http://dx.doi.org/10.1002/jbm.b.33768

Saner Okan, Burcu and Marset Castro, Azucena and Seyyed Monfared Zanjani, Jamal and Akkuş Sut, Pınar and Şen, Özlem and Çulha, Mustafa and Menceloğlu, Yusuf Z. (2016) Thermally exfoliated graphene oxide reinforced fluorinated pentablock poly(l-lactide-co-ε-caprolactone) electrospun scaffolds: Insight into antimicrobial activity and biodegradation. Journal of Applied Polymer Science, 133 (22). ISSN 0021-8995 (Print) 1097-4628 (Online)


Akhmedov, Murodzhon and Çatay, Bülent and Apaydın, Serkan Mehmet (2015) Automating unambiguous NOE data usage in NVR for NMR protein structure-based assignments. Journal of Bioinformatics and Computational Biology, 13 (6). ISSN 0219-7200 (Print) 1757-6334 (Online)

Özler, Saime Burçe and Küçükgül, Can and Koç, Bahattin (2015) 3-boyutlu biyobasım (3D bioprinting). Türkiye Klinikleri Tıbbi Onkoloji Özel Dergisi, 8 (2). pp. 155-161. ISSN 1308-1098 (Print) 2146-8567 (Online)


Güvenek, Ayşegül (2014) A systematic study for evolution of bacterial resistance: phenotype to genotype. [Thesis]

Kahraman, Kadriye (2014) Effects of varied magnesium and potassium nutrition on wheat grown under ambient and elevated atmospheric carbon dioxide conditions. [Thesis]

Soysal, Duygu (2014) The role of SIRT1 on the crosstalk of p65 and NFATS in U937 monocytes under hyperosmotic stress. [Thesis]

Yalçın, Gülperi (2014) Genome editing of the IL-7 receptor gene locus using talens. [Thesis]


Aslanov, Jeyhun and Çatay, Bülent and Apaydın, Serkan Mehmet (2013) An ant colony optimization approach for solving the nuclear magnetic resonance structure based assignment problem. In: 15th Genetic and Evolutionary Computation Conference (GECCO 2013), Amsterdam, The Netherlands

Mollamehmetoğlu, Elif (2013) Cloning and expression of beta subunit (AGB1) of heterotrimeric g-protein complex A.thaliana. [Thesis]

Özbolat, İbrahim T. and Marchany, Michelle and Joseph, A. Gardella, Jr., and Koç, Bahattin (2013) Computer-aided 4D modeling of hydrolytic degradation in micropatterned bioresorbable membranes. Journal of Medical Devices, 7 (2). ISSN 1932-6181 (Print) 1932-619X (Online)

Şahin, Ebru (2013) Detecting motifs for computational classification of dockerin and cohesin sequences. [Thesis]

Yenilmez, Batuhan Orbay (2013) Generation of novel random mutagenesis lipase libraries via directed evolution. [Thesis]

Yıldız Kutman, Bahar (2013) The essential and beneficial roles of nickel In growth of soybean and wheat plants. [Thesis]


Açıksöz Özden, Seher Bahar (2012) Role of nitrogen nutrition in biofortification of durum wheat with iron. [Thesis]

Aktürk, Anıl (2012) Characterization of A. thaliana G-Protein gamma subunit (AGG2) and investigation of DTT effect on its oligomeric state. [Thesis]

Altıntaş, Zeynep (2012) Development of nanoparticle-modified sensor platform for cancer marker detection. [Thesis]

Bakır, Burcu (2012) Bioinformatics approaches to associate single nucleotide polymorphisms with human diseases according to their pathway related context. [Thesis]

Çavuşlar, Gizem and Çatay, Bülent and Apaydın, Serkan Mehmet (2012) A tabu search approach for the NMR protein structure-based assignment problem. IEEE/ACM Transactions on Computational Biology and Bioinformatics, 9 (6). pp. 1621-1628. ISSN 1545-5963

Roçi, Irena (2012) Toward anti-cancer drugs: selection of anti-VEGF and anti-HER2 aptamer to inhibit cancer biomarkers. [Thesis]

Tezil, Tuğsan (2012) Probing the effect of IKK on FOXO3 aregulatory mechanism of apoptosis and autophagy in chemoresistance. [Thesis]

Yükselen, Onur (2012) Combining in silico docking and molecular dynamics simulations to predict the impact of mutations on the substrate specificity of BTL2 lipase. [Thesis]


Albayrak, Aydın (2011) Classification of proteins using sequential and structural features. [Thesis]

Altıntaş, Gamze (2011) Characterization of zinc uptake, translocation and remobilization in hydroponically grown triticum turgidum L. subsp. durum desf. and triticum turgidum L. subsp. dicoccoides genotypes. [Thesis]

Aydın, Mert (2011) Biochemical and biophysical characterization of mutant T. durum metallothionein. [Thesis]

Bayram Akçapınar, Günseli (2011) Protein engineering and covalent modification of trichoderma reesei cellulases in pichia pastories for textile biofinishing. [Thesis]

Kısakürek, Ali Fuat (2011) 2-Deoxyglucose pretreatment sensitizes colon cancer cells to cisplatin and killer trail induced apoptosis by Mcl-1 downregulation. [Thesis]

Özbolat, İbrahim T. and Koç, Bahattin (2011) Multi-function based modeling of 3D heterogeneous wound scaffolds for improved wound healing. Computer-Aided Design & Applications, 8 (1). pp. 43-57. ISSN 1686-4360

Özbolat, İbrahim T. and Koç, Bahattin (2011) A continues multi-material toolpath planning for tissue scaffolds with hollowed features. Computer-Aided Design and Applications, 8 (2). pp. 237-247. ISSN 1686-4360

Ükelgi, Nurten (2011) Isolation, identification and characterization of wine yeast species from grapes of three different vineyards in Turkey. [Thesis]


Abdelgany Hamed, Ahmed Mohamed Elghareb (2010) Molecular and morphophysiological approaches for a better understanding of drought resistance mechanisms in some wheat genotypes. [Thesis]

Akçay, İzzet Mehmet (2010) Transcriptional regulation of IL-7R alpha gene in T lymphocytes. [Thesis]

Altıntaş, Ayşegul (2010) Effects of glyphosate on brachypodium distachyon. [Thesis]

Bakar, Mine (2010) Construction of plant gene expression vectors carrying ath-Mir393a gene and its target gene AFB3. [Thesis]

Cebeci Yalçınkaya, Özge (2010) Molecular analysis of glyphosate and osmotic stress responsive genes. [Thesis]

Çalık, Aslı (2010) Optimization of the production of trichoderma reesei endoglucanase I in pichia pastoris. [Thesis]

Dinçer, Sedef (2010) Aspergillus niger as an expression system for heterologous expression of ROL and BTL2. [Thesis]

Doğan, Esen (2010) Cloning and characterization of a novel abscisic acid (aba)-induced hva22-like protein from triticum turgidum spp. dicoccoides in response to drought stress. [Thesis]

Gül, Özgür (2010) Protein engineering of rhizopus oryzae lipase for improved thermostability. [Thesis]

Kutman, Barış Ümit (2010) Roles of nitrogen and zinc nutrition in biofortification of wheat grain. [Thesis]

Levent, Elif (2010) The role of bax in pmc-f induced cell death mechanism in HCT116 colon carcinoma cell lines. [Thesis]

Mahmoud, Amer Faiz Ahmed (2010) Molecular and biological investigations of damping-off and charcoal-rot diseases in sunflower. [Thesis]

Mehmetoglu, Tuğba (2010) Genomic and proteomic analysis of chemoresistance in breast cancer cell lines: MCF-7 and MDA-MB-231. [Thesis]

Qabaha, Khaled Ibraheem Saleh (2010) Development and optimization of a microwave-assisted protein hydrolysis method to permit amino acid profiling of cultivated and wild wheats and to relate the amino acid to grain mineral concentrations. [Thesis]

Tabak, Ahmet Fatih and Yeşilyurt, Serhat (2010) Validated reduced order models for simulating trajectories of bio-inspired artificial micro-swimmers. In: 8th International Conference on Nanochannels, Microchannels and Minichannels - 3rd Joint US-European Fluids Engineering Summer Meeting and 8th International Conference on Microchannels and Minichannels (FEDSM2010-ICNMM2010), Montreal, Canada

Uzbaş, Fatma (2010) Trichoderma reesei as an expression system for homologous production of individual cellulases. [Thesis]


Arısan, Elif Damla (2009) Molecular mechanism of drug induced apoptosis & chemoresistance in estrogen receptor alpha +/- breast cancer cell lines: mcf-7 and mda-mb-231. [Thesis]

Ateş, Yıldız Özlem (2009) Effect of reactive oxygen species in cisplatin-induced apoptotic response of hct 116 colon carcinoma cells. [Thesis]

Çakmak, İsmail and Yazıcı, M. Atilla and Tutuş, Yusuf and Öztürk, Levent (2009) Glyphosate reduced seed and leaf concentrations of calcium, manganese, magnesium, and iron in non-glyphosate resistant soybean. European Journal of Agronomy, 31 (3 Sp. Iss. SI). pp. 114-119. ISSN 1161-0301

Kısaayak Çollak, Filiz (2009) Cloning expression and purification of durum wheat metallothionein domains and structural modelling. [Thesis]

Küçükural, Alper (2009) Novel techniques for protein structure characterization using graph representation of proteins. [Thesis]

Liv, Nalan (2009) An implementation of functionalized carbon nanotubes on optical biosensors. [Thesis]

Peleg, Zvi and Çakmak, İsmail and Öztürk, Levent and Yazıcı, M. Atilla and Jun, Yan and Budak, Hikmet and Korol, Abraham B. and Fahima, Tzion and Saranga, Yehoshua (2009) Quantitative trait loci conferring grain mineral nutrient concentrations in durum wheat 3 wild emmer wheat RIL population. Theoretical and Applied Genetics, 119 (2). pp. 353-369. ISSN 0040-5752

Soğutmaz Özdemir, Bahar (2009) Application of biotechnological tools to model plant: brachypodium distachyon. [Thesis]

Su, Y. Senem and Öztürk, Levent and Çakmak, İsmail and Budak, Hikmet (2009) Turfgrass species response exposed to increasing rates of glyphosate application. European Journal of Agronomy, 31 (3 Sp. Iss. SI). pp. 120-125. ISSN 1161-0301


Karaca, Esra (2008) Role of aven in apoptotic response following paclitaxel and docetaxel treatment in mda-mb231 breast cancer cells. [Thesis]

Karslı, Gizem (2008) Possible anticancer effects of pmc-a through the mechanisms of mitochondrial apoptosis and cell cycle arrest in colon carcinoma cell lines; hct116 wt and bax (-/-). [Thesis]

Kaymak, Ebru (2008) Arabidopsis thaliana lipases: cloning and expression in pichia pastoris. [Thesis]

Onat, Ayda (2008) Effects of Istanbul metropolitan municipality compost product on plant growth, mineral nutrients and heavy metals in plant and soil. [Thesis]

Özdemir, Özge (2008) Accumulation of selenium in different wheat genotypes and its protective role against various abiotic stress factors. [Thesis]

Saltukoğlu, Deniz (2008) Role of mapks in er stress-related cell cycle arrest and apoptosis. [Thesis]

Yeşil, Emel (2008) Genetic variation for salt and zinc defficiency tolerance in aegilops tauschii. [Thesis]

Yeşilırmak, Filiz (2008) Biophysical and functional characterization of wheat metallothionein at molecular level. [Thesis]

Yılancıoğlu, Kaan (2008) Pramanicin-a induces apoptosis in hct116 colon carcinoma cells: activation of jnk, p38, erk1/2 and induction of oxidative stress. [Thesis]

Yılmaz, Sinem (2008) Role of bcl-2 family members in 4-hne induced apoptosis. [Thesis]


Yardımcı, Galip Gürkan (2007) Structural alignment using network properties. [Thesis]

This list was generated on Thu Jan 19 05:03:00 2017 +03.