title   
  

Subject: TA164 Bioengineering

Number of items at this level: 127.

2017

Asif, Muhammad (2017) Effects of major global climate change components on nutritional physiology and biofortification of wheat. [Thesis]

Avşar, Bihter (2017) Investigation of structural properties of heterotrimeric G-Proteins y subunits in plants. [Thesis]

Bakırcı, Ezgi and Toprakhisar, Burak and Zeybek, Mehmet Can and Özaydın İnce, Gözde and Koç, Bahattin (2017) Cell sheet based bioink for 3D bioprinting applications. Biofabrication, 9 (2). ISSN 1758-5082 (Print) 1758-5090 (Online)

Çetin, Ronay (2017) Targeting transcription factor binding sites of the interleukin 7 receptor gene using CRISPR/CAS9 genome editing. [Thesis]

Erbil Bilir, Seçil (2017) Identification and characterization of novel mammalian autophagy proteins. [Thesis]

Ergüner, Bekir (2017) Computational methods for analyzing ngs data to discover clinically relevant mutations. [Thesis]

Kale, Sameer and Khani, Navid and Nadernezhad, Ali and Koç, Bahattin (2017) Modeling and additive manufacturing of biomimetic heterogeneous Scaffold. In: 3rd CIRP Conference on BioManufacturing, Chicago, USA

Karakaş Schüller, Hacer Ezgi (2017) Tumor-stroma communication through activation of autophagy in fibroblast cells, an important component of stroma. [Thesis]

Karakaş, Bahriye (2017) Exploring the effects of mitochondrial estrogen receptors on mitochondrial priming and endocrine therapy response in breast cancer cells. [Thesis]

Khalid, Zoya (2017) Computational approaches to study drug resistance mechanisms. [Thesis]

Khani, Navid and Nadernezhad, Ali and Bartolo, Paulo and Koç, Bahattin (2017) Hierarchical and spatial modeling and bio-additive manufacturing of multi-material constructs. CIRP Annals - Manufacturing Technology, 66 (1). pp. 229-232. ISSN 0007-8506 (Print) 1726-0604 (Online)

Kılıç, Seval (2017) The role of atypical and classical protein kinase C isozymes in autophagy and modulation of lysosomal pH by vacuolar atpase as an alternative treatment approach for Gaucher disease. [Thesis]

Nadernezhad, Ali and Khani, Navid and Koç, Bahattin (2017) Biomanufacturing of heterogeneous hydrogel structures with patterned electrically conductive regions. In: 3rd CIRP Conference on BioManufacturing, Chicago, USA

Parlar, Ayhan (2017) A novel approach in cancer immunotherapy: natural killer cells expressing T cell receptors. [Thesis]

Sadeghi, Sahl (2017) Development of microfluidic cell growth and stress response analysis platforms at single cell resolution. [Thesis]

Saraç, Aydan (2017) Mapping intracellular immune responses against lentiviral vectors in natural killer cells using genome scale crispr-knockout. [Thesis]

Sayitoğlu, Ece Canan (2017) Intracellular immunodynamics of lentiviral gene delivery in human natural killer cells. [Thesis]

Ullah, Naimat (2017) Comparative metabolite profiling of drought stress responsive biochemical pathways in root and leaves of triticeae species. [Thesis]

Yavuz, Ahmet Sinan (2017) Predictive analysis of conditional epigenetic variability. [Thesis]

Yedier, Özlem (2017) Analysis of the effect of novel PKC isozymes on autophagy and utilization of nanoparticles as a new therapeutic approach for gaucher disease. [Thesis]

Yenenler, Aslı (2017) Protein engineering applications for functional enhancement of cellulase and lipase enzymes. [Thesis]

2016

Bayraktar, Öznur (2016) VCP/p97 mutant protein is an autophagy target. [Thesis]

Bulut, Reyyan Fatima (2016) Genome-wide microRNA identification in drought tolerant wild emmer wheat: assesment of antimicrobial activity of surface active antimic agent on raw fruit and vegetable packaging. [Thesis]

Carlier, Aurelli and Akdeniz Skvortsov, Gözde and Hafezi, Forough and Ferraris, Eleonora and Patterson, Jennifer and Koç, Bahattin and Oosterwyck, Hans Van (2016) Computational model-informed design and bioprinting of cell-patterned constructs for bone tissue engineering. Biofabrication, 8 (2). ISSN 1758-5082 (Print) 1758-5090 (Online)

Çetin Karayumak, Süheyla (2016) Modeling of tubular structures and fibers in in vivo data: revealing asymmetry in human vasculature and white matter fiber tracts. [Thesis]

Çokol Çakmak, Melike (2016) Systematic screen of double and triple drug combinations against erwinia amylovora, the causative agent for fire blight. [Thesis]

Çolak, Ersoy (2016) Heterotrimeric g-protein alpha (α) subunit from A. thaliana (AtGPA1) forms trimeric structures in solution. [Thesis]

Elitaş, Meltem and Zeinali, Soheila (2016) Modeling and simulation of EGF-CSF-1 pathway to investigate Glioma - Macrophage interaction in brain tumors. International Journal of Cancer Studies & Research (IJCR): Special Issue On "Advances in Brain Cancer Research", 5 . pp. 1-8. ISSN 2167-9118

Oruç, Tuğçe (2016) Lipid bilayer permeation of an aliphatic amine drug: modeling with molecular dynamics simulations and kinetic rate equations. [Thesis]

Özer, Buğra (2016) Exploration of methylation-driven mechanisms in cancer. [Thesis]

Özler, Saime Burçe and Bakırcı, Ezgi and Küçükgül, Can and Koç, Bahattin (2016) Three-dimensional direct cell bioprinting for tissue engineering. Journal of Biomedical Materials Research Part B: Applied Biomaterials . ISSN 1552-4973 (Print) 1552-4981 (Online) Published Online First http://dx.doi.org/10.1002/jbm.b.33768

Saner Okan, Burcu and Marset Castro, Azucena and Seyyed Monfared Zanjani, Jamal and Akkuş Sut, Pınar and Şen, Özlem and Çulha, Mustafa and Menceloğlu, Yusuf Z. (2016) Thermally exfoliated graphene oxide reinforced fluorinated pentablock poly(l-lactide-co-ε-caprolactone) electrospun scaffolds: Insight into antimicrobial activity and biodegradation. Journal of Applied Polymer Science, 133 (22). ISSN 0021-8995 (Print) 1097-4628 (Online)

Shamloo, Bahar (2016) Characterization of the C-terminal domain of the P53 tumor suppressor. [Thesis]

Sinoplu, Esra (2016) Development of spion-based theranostic nanocarriers for small rna delivery and cancer gene therapy. [Thesis]

Toprakhisar, Burak (2016) Development of tendon derived natural extracellular matrix hydrogels for 3D bioprinting applications. [Thesis]

2015

Akhmedov, Murodzhon and Çatay, Bülent and Apaydın, Serkan Mehmet (2015) Automating unambiguous NOE data usage in NVR for NMR protein structure-based assignments. Journal of Bioinformatics and Computational Biology, 13 (6). ISSN 0219-7200 (Print) 1757-6334 (Online)

Akpınar, Bala Anı (2015) Next-generation sequencing and physical mapping of wheat chromosome 5D and comparison with its wild progenitor. [Thesis]

Al-Murtadha, Asma Abdullah Abdulwahab (2015) Microscopic analysis of aneuploidy induced by the mutation of the CCDC124 gene. [Thesis]

Canpolat, Baran (2015) Covalent modification of cellulases for textile biofinishing. [Thesis]

Ceylan, Yasemin (2015) Changes in growth and magnesium concentration of wheat and coffee plants grown under various magnesium and water stress treatments. [Thesis]

Kantar, Melda (2015) Diversity of microRNAs and genes towards development of drought tolerant wheat. [Thesis]

Özcan, Ahsen (2015) Modeling of the mechanism of the glucocorticoid resistance using CRISPR/Cas9 mediated genome editing. [Thesis]

Özler, Saime Burçe and Küçükgül, Can and Koç, Bahattin (2015) 3-boyutlu biyobasım (3D bioprinting). Türkiye Klinikleri Tıbbi Onkoloji Özel Dergisi, 8 (2). pp. 155-161. ISSN 1308-1098 (Print) 2146-8567 (Online)

Tekdal, Dilek (2015) Studies on molecular and genetic characterization of the genes responsible for the multicarpellary gynoecium in thermopsis turcica. [Thesis]

Tekirdağ Koşar, Kumsal Ayşe (2015) Microrna dependent control and regulation mechanisms of autophagy in health and disease. [Thesis]

Timuçin, Ahmet Can (2015) Identification of SIRT1 as a novel regulator of NFAT5 dependent aldose reductase expression under osmatic stress. [Thesis]

Uysal, Ebru (2015) Impacts of single-walled carbon nanotubes on polymerase chain reaction. [Thesis]

Vuruşaner Aktaş, Beyza (2015) Survival signals induced by cholesterol oxidation by-products in atherosclerosis. [Thesis]

Zakharyuta, Anastasia (2015) Nanosized crosslinked protein aggregates (nano-CLPA). [Thesis]

2014

Altınuşak, Tuğçe (2014) Catastrophic evolution of trimethoprim resistance. [Thesis]

Deniz, Emre (2014) The role of PATZ1 transcription factor in the DNA damage response. [Thesis]

Güvenek, Ayşegül (2014) A systematic study for evolution of bacterial resistance: phenotype to genotype. [Thesis]

Kahraman, Kadriye (2014) Effects of varied magnesium and potassium nutrition on wheat grown under ambient and elevated atmospheric carbon dioxide conditions. [Thesis]

Karaboğa, Enes (2014) S-Pyocins as potential antimicrobial agents for eradicating pseudomonas aeruginosa biofilms. [Thesis]

Keskin, Nazlı (2014) Identification of PATZ1 transcription factor as a novel interacting partner and regulator of the p53 tumor suppressor protein. [Thesis]

Köse, Hazal Büşra (2014) Expression and purification of arabidopsis thaliana heterotrimeric G protein alpha subunit (GPA1) using bacteria and yeast systems. [Thesis]

Mengütay, Melis (2014) Adequate magnesium nutrition mitigates adverse effects of heat and high light stress on maize and wheat. [Thesis]

Sırlı, Serkan (2014) Investigations on the n-linked glycosylation of the aspergillus niger lipase in pichia pastoris. [Thesis]

Soysal, Duygu (2014) The role of SIRT1 on the crosstalk of p65 and NFATS in U937 monocytes under hyperosmotic stress. [Thesis]

Tamer, Yusuf Talha (2014) Studying genetic and enzymatic constraints driving evolution of antibiotic resistance. [Thesis]

Yalçın, Gülperi (2014) Genome editing of the IL-7 receptor gene locus using talens. [Thesis]

Yılancıoğlu, Kaan (2014) Genetic, physiological and biotechnological assessment of microorganisms for renewable and sustainable energy resource production. [Thesis]

2013

Aslanov, Jeyhun and Çatay, Bülent and Apaydın, Serkan Mehmet (2013) An ant colony optimization approach for solving the nuclear magnetic resonance structure based assignment problem. In: 15th Genetic and Evolutionary Computation Conference (GECCO 2013), Amsterdam, The Netherlands

Meydan, Cem (2013) Discovering discriminative and class-specific sequence and structural motifs in proteins. [Thesis]

Mollamehmetoğlu, Elif (2013) Cloning and expression of beta subunit (AGB1) of heterotrimeric g-protein complex A.thaliana. [Thesis]

Ova, Emir Ali (2013) Adverse effect of high phosphorus on plant zinc concentration expressed differently in wheat plants grown in soil and nutrient solution. [Thesis]

Öz, Tuğçe (2013) Investigating evolutionary trade-offs for designing novel strategies to slow down evolution of antibiotic resistance. [Thesis]

Özbolat, İbrahim T. and Marchany, Michelle and Joseph, A. Gardella, Jr., and Koç, Bahattin (2013) Computer-aided 4D modeling of hydrolytic degradation in micropatterned bioresorbable membranes. Journal of Medical Devices, 7 (2). ISSN 1932-6181 (Print) 1932-619X (Online)

Şahin, Ebru (2013) Detecting motifs for computational classification of dockerin and cohesin sequences. [Thesis]

Temiz, Şeyda Şaziye (2013) Generation of Xanthomonas derived TALE proteins that inhibit gene transcription. [Thesis]

Yenilmez, Batuhan Orbay (2013) Generation of novel random mutagenesis lipase libraries via directed evolution. [Thesis]

Yıldız Kutman, Bahar (2013) The essential and beneficial roles of nickel In growth of soybean and wheat plants. [Thesis]

2012

Açıksöz Özden, Seher Bahar (2012) Role of nitrogen nutrition in biofortification of durum wheat with iron. [Thesis]

Aktürk, Anıl (2012) Characterization of A. thaliana G-Protein gamma subunit (AGG2) and investigation of DTT effect on its oligomeric state. [Thesis]

Altıntaş, Zeynep (2012) Development of nanoparticle-modified sensor platform for cancer marker detection. [Thesis]

Bakır, Burcu (2012) Bioinformatics approaches to associate single nucleotide polymorphisms with human diseases according to their pathway related context. [Thesis]

Çavuşlar, Gizem and Çatay, Bülent and Apaydın, Serkan Mehmet (2012) A tabu search approach for the NMR protein structure-based assignment problem. IEEE/ACM Transactions on Computational Biology and Bioinformatics, 9 (6). pp. 1621-1628. ISSN 1545-5963

Durmaz, Emel (2012) Protein engineering studies on bacillus thermocatenulatus lipase. [Thesis]

Roçi, Irena (2012) Toward anti-cancer drugs: selection of anti-VEGF and anti-HER2 aptamer to inhibit cancer biomarkers. [Thesis]

Tezil, Tuğsan (2012) Probing the effect of IKK on FOXO3 aregulatory mechanism of apoptosis and autophagy in chemoresistance. [Thesis]

Yükselen, Onur (2012) Combining in silico docking and molecular dynamics simulations to predict the impact of mutations on the substrate specificity of BTL2 lipase. [Thesis]

2011

Albayrak, Aydın (2011) Classification of proteins using sequential and structural features. [Thesis]

Altıntaş, Gamze (2011) Characterization of zinc uptake, translocation and remobilization in hydroponically grown triticum turgidum L. subsp. durum desf. and triticum turgidum L. subsp. dicoccoides genotypes. [Thesis]

Aydın, Mert (2011) Biochemical and biophysical characterization of mutant T. durum metallothionein. [Thesis]

Bayram Akçapınar, Günseli (2011) Protein engineering and covalent modification of trichoderma reesei cellulases in pichia pastories for textile biofinishing. [Thesis]

Kısakürek, Ali Fuat (2011) 2-Deoxyglucose pretreatment sensitizes colon cancer cells to cisplatin and killer trail induced apoptosis by Mcl-1 downregulation. [Thesis]

Özbolat, İbrahim T. and Koç, Bahattin (2011) Multi-function based modeling of 3D heterogeneous wound scaffolds for improved wound healing. Computer-Aided Design & Applications, 8 (1). pp. 43-57. ISSN 1686-4360

Özbolat, İbrahim T. and Koç, Bahattin (2011) A continues multi-material toolpath planning for tissue scaffolds with hollowed features. Computer-Aided Design and Applications, 8 (2). pp. 237-247. ISSN 1686-4360

Ükelgi, Nurten (2011) Isolation, identification and characterization of wine yeast species from grapes of three different vineyards in Turkey. [Thesis]

2010

Abdelgany Hamed, Ahmed Mohamed Elghareb (2010) Molecular and morphophysiological approaches for a better understanding of drought resistance mechanisms in some wheat genotypes. [Thesis]

Akçay, İzzet Mehmet (2010) Transcriptional regulation of IL-7R alpha gene in T lymphocytes. [Thesis]

Altıntaş, Ayşegul (2010) Effects of glyphosate on brachypodium distachyon. [Thesis]

Bakar, Mine (2010) Construction of plant gene expression vectors carrying ath-Mir393a gene and its target gene AFB3. [Thesis]

Cebeci Yalçınkaya, Özge (2010) Molecular analysis of glyphosate and osmotic stress responsive genes. [Thesis]

Çalık, Aslı (2010) Optimization of the production of trichoderma reesei endoglucanase I in pichia pastoris. [Thesis]

Dinçer, Sedef (2010) Aspergillus niger as an expression system for heterologous expression of ROL and BTL2. [Thesis]

Doğan, Esen (2010) Cloning and characterization of a novel abscisic acid (aba)-induced hva22-like protein from triticum turgidum spp. dicoccoides in response to drought stress. [Thesis]

Gül, Özgür (2010) Protein engineering of rhizopus oryzae lipase for improved thermostability. [Thesis]

Kutman, Barış Ümit (2010) Roles of nitrogen and zinc nutrition in biofortification of wheat grain. [Thesis]

Levent, Elif (2010) The role of bax in pmc-f induced cell death mechanism in HCT116 colon carcinoma cell lines. [Thesis]

Mahmoud, Amer Faiz Ahmed (2010) Molecular and biological investigations of damping-off and charcoal-rot diseases in sunflower. [Thesis]

Mehmetoglu, Tuğba (2010) Genomic and proteomic analysis of chemoresistance in breast cancer cell lines: MCF-7 and MDA-MB-231. [Thesis]

Qabaha, Khaled Ibraheem Saleh (2010) Development and optimization of a microwave-assisted protein hydrolysis method to permit amino acid profiling of cultivated and wild wheats and to relate the amino acid to grain mineral concentrations. [Thesis]

Saygı, Ceren (2010) Durum wheat metallothionein mutants and their biophysical characterization. [Thesis]

Tabak, Ahmet Fatih and Yeşilyurt, Serhat (2010) Validated reduced order models for simulating trajectories of bio-inspired artificial micro-swimmers. In: 8th International Conference on Nanochannels, Microchannels and Minichannels - 3rd Joint US-European Fluids Engineering Summer Meeting and 8th International Conference on Microchannels and Minichannels (FEDSM2010-ICNMM2010), Montreal, Canada

Uzbaş, Fatma (2010) Trichoderma reesei as an expression system for homologous production of individual cellulases. [Thesis]

2009

Arısan, Elif Damla (2009) Molecular mechanism of drug induced apoptosis & chemoresistance in estrogen receptor alpha +/- breast cancer cell lines: mcf-7 and mda-mb-231. [Thesis]

Ateş, Yıldız Özlem (2009) Effect of reactive oxygen species in cisplatin-induced apoptotic response of hct 116 colon carcinoma cells. [Thesis]

Çakmak, İsmail and Yazıcı, M. Atilla and Tutuş, Yusuf and Öztürk, Levent (2009) Glyphosate reduced seed and leaf concentrations of calcium, manganese, magnesium, and iron in non-glyphosate resistant soybean. European Journal of Agronomy, 31 (3 Sp. Iss. SI). pp. 114-119. ISSN 1161-0301

Kısaayak Çollak, Filiz (2009) Cloning expression and purification of durum wheat metallothionein domains and structural modelling. [Thesis]

Küçükural, Alper (2009) Novel techniques for protein structure characterization using graph representation of proteins. [Thesis]

Liv, Nalan (2009) An implementation of functionalized carbon nanotubes on optical biosensors. [Thesis]

Peleg, Zvi and Çakmak, İsmail and Öztürk, Levent and Yazıcı, M. Atilla and Jun, Yan and Budak, Hikmet and Korol, Abraham B. and Fahima, Tzion and Saranga, Yehoshua (2009) Quantitative trait loci conferring grain mineral nutrient concentrations in durum wheat 3 wild emmer wheat RIL population. Theoretical and Applied Genetics, 119 (2). pp. 353-369. ISSN 0040-5752

Soğutmaz Özdemir, Bahar (2009) Application of biotechnological tools to model plant: brachypodium distachyon. [Thesis]

Su, Y. Senem and Öztürk, Levent and Çakmak, İsmail and Budak, Hikmet (2009) Turfgrass species response exposed to increasing rates of glyphosate application. European Journal of Agronomy, 31 (3 Sp. Iss. SI). pp. 120-125. ISSN 1161-0301

2008

Karaca, Esra (2008) Role of aven in apoptotic response following paclitaxel and docetaxel treatment in mda-mb231 breast cancer cells. [Thesis]

Karslı, Gizem (2008) Possible anticancer effects of pmc-a through the mechanisms of mitochondrial apoptosis and cell cycle arrest in colon carcinoma cell lines; hct116 wt and bax (-/-). [Thesis]

Kaymak, Ebru (2008) Arabidopsis thaliana lipases: cloning and expression in pichia pastoris. [Thesis]

Onat, Ayda (2008) Effects of Istanbul metropolitan municipality compost product on plant growth, mineral nutrients and heavy metals in plant and soil. [Thesis]

Özdemir, Özge (2008) Accumulation of selenium in different wheat genotypes and its protective role against various abiotic stress factors. [Thesis]

Saltukoğlu, Deniz (2008) Role of mapks in er stress-related cell cycle arrest and apoptosis. [Thesis]

Yeşil, Emel (2008) Genetic variation for salt and zinc defficiency tolerance in aegilops tauschii. [Thesis]

Yeşilırmak, Filiz (2008) Biophysical and functional characterization of wheat metallothionein at molecular level. [Thesis]

Yılancıoğlu, Kaan (2008) Pramanicin-a induces apoptosis in hct116 colon carcinoma cells: activation of jnk, p38, erk1/2 and induction of oxidative stress. [Thesis]

Yılmaz, Sinem (2008) Role of bcl-2 family members in 4-hne induced apoptosis. [Thesis]

2007

Yardımcı, Galip Gürkan (2007) Structural alignment using network properties. [Thesis]

UNSPECIFIED

Tunç, Cevza Esin Changes in root morphology and nutrient uptake in wheat plants with varied potassium and magnesium supply. [Thesis]

This list was generated on Wed May 23 04:17:09 2018 +03.