Items where Division is "Biological Sciences & Bio Eng." and Year is 2020

A

Acar, O. and Izydorczyk, M. S. and Kletke, J. and Yazıcı, Mustafa Atilla and Özdemir, B. and Çakmak, İsmail and Köksel, H. (2020) Effects of roller and hammer milling on the yield and physicochemical properties of fibre-rich fractions from biofortified and non-biofortified hull-less barley. Journal of Cereal Science, 92 . ISSN 0733-5210 (Print) 1095-9963 (Online)

Acar, Oğuz and Izydorczyk, Marta S. and Kletke, Jerry and Yazıcı, M. Atilla and İmamoğlu, Aydın and Çakmak, İsmail and Köksel, Hamit (2020) Comparison of short and long milling flows on yield and physicochemical properties of brans from biofortified and nonbiofortified hull-less oats. Cereal Chemistry, 97 (4). pp. 859-867. ISSN 0009-0352 (Print) 1943-3638 (Online)

Adebali, Ogün and Bircan, Aylin and Çirci, Defne and İşlek, Burak and Kilinçer, Zeynep and Selçuk, Berkay and Turhan, Berk (2020) Phylogenetic analysis of sars-cov-2 genomes in Turkey. Turkish Journal of Biology (SI), 44 (3). pp. 146-156. ISSN 1300-0152 (Print) 1303-6092 (Online)

Ağca, Cavit and Grimm, Christian (2020) A simple guide for generating BAC transgenic animals for retinal research. In: Mao, Chai-An, (ed.) Retinal Development: Methods and Protocols. Methods in Molecular Biology, 2092. Springer, US, pp. 109-122. ISBN 978-1-0716-0174-7 (Print) 978-1-0716-0175-4 (Online)

Akkaş Mohammadmoradi, Tuğçe and Zakharyuta, Anastasia and Taralp, Alpay and Ow-Yang, Cleva W. (2020) Cross-linked enzyme lyophilisates (CLELs) of urease: a new method to immobilize ureases. Enzyme and Microbial Technology, 132 . ISSN 0141-0229 (Print) 1879-0909 (Online)

Akkoç, Yunus and Gözüaçık, Devrim (2020) MicroRNAs as major regulators of the autophagy pathway. Biochimica et Biophysica Acta - Molecular Cell Research, 1867 (5). ISSN 0167-4889 (Print) 1879-2596 (Online)

Altun, Hamza Yusuf (2020) Shedding new light on intracellular signaling pathways-establishing live-cell fluorescence imaging techniques using genetically encoded fluorescent biosensors. [Thesis]

Asif, Muhammad and Zora, Seray and Ceylan Şen, Yasemin and Rehman, Raheela and Öztürk, Levent (2020) Nitrogen supply in combination of nitrate and ammonium enhances harnessing of elevated atmospheric CO2 through improved nitrogen and carbon metabolism in wheat (Triticum aestivum). Crop and Pasture Science, 71 (2). pp. 101-112. ISSN 1836-0947 (Print) 1836-5795 (Online)

Azgari, Cem (2020) Genome-wide effects of DNA replication on nucleotide excision repair of UV-Induced DNA lesions. [Thesis]

B

Baykal-Köse, Seda and Acikgoz, Eda and Yavuz, Ahmet Sinan and Geyik, Öykü Gönül and Ateş, Halil and Sezerman, Osman Uğur and Özsan, Güner Hayri and Yüce, Zeynep (2020) Adaptive phenotypic modulations lead to therapy resistance in chronic myeloid leukemia cells. PLoS ONE, 15 (2). ISSN 1932-6203

Bedir, Seden (2020) Functional analysis of a novel mutation in the CD70 gene leading to primary immunodeficiency disease. [Thesis]

Biçen, Ozan and Lehtomaki, Janne J. and Akyıldız, Ian F. (2020) Statistical modeling and bit error rate analysis for bio-sensor receivers in molecular communication. IEEE Sensors Journal, 20 (1). pp. 261-268. ISSN 1530-437X (Print) 1558-1748 (Online)

Bilge, İpek (2020) Identification of powdery mildew disease and genetic improvements in hazelnut. [Thesis]

Birinci, Yelda and Kolkar, Javed and Çetin, Öznur and Başağa, Hüveyda (2020) Quercetin in the form of a nano-antioxidant (QTiO(2)) provides stabilization of quercetin and maximizes its antioxidant capacity in the mouse fibroblast model. Enzyme and Microbial Technology, 138 . ISSN 0141-0229 (Print) 1879-0909 (Online)

Borofsky, Talia and Barranca, Victor J. and Zhou, Rebecca and Von Trentini, Dora and Broadrup, Robert L. and Mayack, Christopher (2020) Hive minded: like neurons, honey bees collectively integrate negative feedback to regulate decisions. Animal Behaviour, 168 . pp. 33-44. ISSN 0003-3472

Budak, Hikmet and Kaya, Sezgi and Çağırıcı, Halise Büşra (2020) Long non-coding RNA in plants in the era of reference sequences. Frontiers in Plant Science, 11 . ISSN 1664-462X

Buleandra, Mihaela and Moldovan, Zenovia and Badea, Irinel Adriana and David, Iulia Gabriela and Popa, Dana Elena and Oprea, Eliza and Tekiner Çağlar, Tugce Ayca and Başağa, Hüveyda (2020) Comparative assessment of the volatile profile, antioxidant capacity and cytotoxic potential of different preparation of Millefolli herba samples. Revista de Chimie, 71 (3). pp. 69-78. ISSN 0034-7752

Bullock, Emma J. and Schafsnitz, Alexis M. and Wang, Chloe H. and Broadrup, Robert L. and Macherone, Anthony and Mayack, Christopher and White, Helen K. (2020) Silicone wristbands as passive samplers in honey bee hives. Veterinary Sciences, 7 (3). ISSN 2306-7381

D

Degryse, Fien and Da Silva, Rodrigo C. and Baird, Roslyn and Çakmak, İsmail and Yazıcı, Mustafa Atilla and McLaughlin, Mike J. (2020) Comparison and modelling of extraction methods to assess agronomic effectiveness of fertilizer zinc. Journal of Plant Nutrition and Soil Science, 183 (2). pp. 248-259. ISSN 1436-8730 (Print) 1522-2624 (Online)

Durak, Saliha and Arasoglu, Tulin and Ates, Sezen Canim and Derman, Serap (2020) Enhanced antibacterial and antiparasitic activity of multifunctional polymeric nanoparticles. Nanotechnology, 31 (17). ISSN 0957-4484 (Print) 1361-6528 (Online)

Durak, Saliha and Esmaeili Rad, Monireh and Yetişgin, Abuzer Alp and Şutova, Hande Eda and Kutlu, Özlem and Çetinel, Sibel and Zarrabi, Ali (2020) Niosomal drug delivery systems for ocular disease-recent advances and future prospects. Nanomaterials, 10 (6). ISSN 2079-4991

E

Eroğlu, Emrah and Michel, Thomas and Graier, Wolfgang F. and Malli, Roland (2020) Yes (again) to local NO. Nature Chemical Biology, 16 (6). pp. 606-607. ISSN 1552-4450 (Print) 1552-4469 (Online)

F

Fatiukha, Andrii and Klymiuk, Valentyna and Peleg, Zvi and Saranga, Yehoshua and Çakmak, İsmail and Krugman, Tamar and Korol, Abraham B. and Fahima, Tzion (2020) Variation in phosphorus and sulfur content shapes the genetic architecture and phenotypic associations within the wheat grain ionome. Plant Journal, 101 (3). pp. 555-572. ISSN 0960-7412 (Print) 1365-313X (Online)

G

Gumerov, Vadim M. and Ortega, Davi R. and Adebali, Ogün and Ulrich, Luke E. and Zhulin, Igor B. (2020) MiST 3.0: an updated microbial signal transduction database with an emphasis on chemosensory systems. Nucleic Acid Research, 48 (D1). D459-D464. ISSN 0305-1048 (Print) 1362-4962 (Online)

H

Hosseinpour Shafaghi, Ali and Rokhsar Talabazar, Farzad and Koşar, Ali and Ghorbani, Morteza (2020) On the effect of the respiratory droplet generation condition on COVID-19 transmission. Fluids, 5 (3). ISSN 2311-5521

J

Jalalypour, Farzaneh (2020) Developing New Applications for Perturbation Response Scanning Method to Study Conformational Modulation of Globular Proteins. [Thesis]

K

Kahraman, Kadriye (2020) Hazelnut genome and transcriptome analysis under biotic and abiotic stress. [Thesis]

Kaleli, Hümeyra Nur and Özer, Ebru and Kaya, Veysel Oğulcan and Kutlu, Özlem (2020) Protein kinase C isozymes and autophagy during neurodegenerative disease progression. Cells, 9 (3). ISSN 2073-4409

Kaplan Türköz, Burcu and Aktürk, Anıl and Sayers, Zehra (2020) Oligomerization of A. thaliana heterotrimeric G protein subunits AGB1 and AGG2 in vitro. Protein Journal, 39 (5). pp. 563-573. ISSN 1572-3887 (Print) 1875-8355 (Online)

Kara, Goknur and Parlar, Ayhan and Çakmak, Melike Çokol and Cokol, Murat and Denkbas, Emir Baki and Bakan Mısırlıoğlu, Feray (2020) Silencing of survivin and cyclin B1 through siRNA-loaded arginine modified calcium phosphate nanoparticles for non-small-cell lung cancer therapy. Colloids and Surfaces B: Biointerfaces, 196 . ISSN 0927-7765 (Print) 1873-4367 (Online)

Kaya, Veysel Oğulcan (2020) In silico analysis of coding single-nucleotide polymorphism (SNP)'s in glucocerebrosidase (GBA) gene and their impact on the biological functions of the cell. [Thesis]

Kırımtay, Koray and Selçuk, Ece and Kelle, Dolunay and Erman, Batu and Karabay, Arzu (2020) p53 regulates katanin-p60 promoter in HCT 116 cells. Gene, 727 . ISSN 0378-1119 (Print) 1879-0038 (Online)

Kose, Melis and Canda, Ebru and Kagnici, Mehtap and Aykut, Ayça and Adebali, Ogün and Durmaz, Asude and Bircan, Aylin and Diniz, Gulden and Eraslan, Cenk and Kose, Engin and Ünalp, Aycan and Yılmaz, Ünsal and Ozyilmaz, Berk and Özdemir, Taha Reşid and Atik, Tahir and Uçar, Sema Kalkan and McFarland, Robert and Taylor, Robert W. and Brown, Garry K. and Çoker, Mahmut and Özkınay, Ferda (2020) SURF1 related Leigh syndrome: clinical and molecular findings of 16 patients from Turkey. Molecular Genetics and Metabolism Reports, 25 . ISSN 2214-4269

Kuru, Halil İbrahim and Büyüközkan, Mustafa and Taştan, Öznur (2020) PRER: A patient representation with pairwise relative expression of proteins on biological networks. In: Satellite Workshop on Computational Cancer Biology (RECOMB-CCB) - Jointly with RECOMB 2020, Virtual

L

Liu, Gökşin and Atılgan, Canan and Sayers, Zehra (2020) Structure-function investigation of haemophilus influenzae ferric binding protein under changing environmental conditions. In: 64th Annual Meeting of the Biophysical-Society, San Diego, CA

M

Mayack, Christopher and Carmichael, Kathleen and Phalen, Nicole and Khan, Zaeema and Hirche, Frank and Stangl, Gabriele I. and White, Helen K. (2020) Gas chromatography - Mass spectrometry as a preferred method for quantification of insect hemolymph sugars. Journal of Insect Physiology, 127 . ISSN 0022-1910

N

Naba, Noel Mopouguini and Tolay, Nazife and Erman, Batu and Sayi Yazgan, Ayca (2020) Doxorubicin inhibits miR-140 expression and upregulates PD-L1 expression in HCT116 cells, opposite to its effects on MDA-MB-231 cells. Turkish Journal of Biology, 44 (1). pp. 15-23. ISSN 1300-0152 (Print) 1303-6092 (Online)

P

Peker, Nesibe and Gözüaçık, Devrim (2020) Autophagy as a cellular stress response mechanism in the nervous system. Journal of Molecular Biology, 432 (8). pp. 2560-2588. ISSN 0022-2836 (Print) 1089-8638 (Online)

Phuphong, Piyawan and Çakmak, İsmail and Yazıcı, Mustafa Atilla and Rerkasem, Benjavan and Prom-u-Thai, Chanakan (2020) Shoot and root growth of rice seedlings as affected by soil and foliar zinc applications. Journal of Plant Nutrition, 43 (9). pp. 1259-1267. ISSN 0190-4167 (Print) 1532-4087 (Online)

Piepoli, Sofia (2020) Characterization of the PATZ1 BTB domain. [Thesis]

Piepoli, Sofia and Shamloo, Bahar and Bircan, Aylin and Adebali, Ogün and Erman, Batu (2020) Molecular biology of sars-cov-2 [Sars-cov-2'nin moleküler biyolojisi]. Turkish Journal of Immunology, 8 (2). pp. 73-88. ISSN 1301-109X

R

Rempelos, Leonidas and Almuayrifi, Mohammed Saleh Bady and Baranski, Marcin and Tetard-Jones, Catherine and Barkla, Bronwyn and Çakmak, İsmail and Öztürk, Levent and Cooper, Julia and Volakakis, Nikolaos and Hall, Gavin and Zhao, Bingqiang and Rose, Terry J. and Wang, Juan and Kalee, Hassan A. and Sufar, Enas and Hasanalieya, Gultakin and Bilsborrow, Paul and Leifert, Carlo (2020) The effect of agronomic factors on crop health and performance of winter wheat varieties bred for the conventional and the low input farming sector. Field Crops Research, 254 . ISSN 0378-4290 (Print) 1872-6852 (Online)

S

Saeedi Saravi, Seyed Soheil and Eroğlu, Emrah and Waldeck-Weiermair, Markus and Sorrentino, Andrea and Steinhorn, Benjamin and Belousov, Vselovod and Michel, Thomas (2020) Differential endothelial signaling responses elicited by chemogenetic H2O2 synthesis. Redox Biology, 36 . ISSN 2213-2317

T

Talebian Gevari, Moein and Abbasiasl, Taher and Niazi, Soroush and Ghorbani, Morteza and Koşar, Ali (2020) Direct and indirect thermal applications of hydrodynamic and acoustic cavitation: a review. Applied Thermal Engineering, 171 . ISSN 1359-4311

Talebian Gevari, Moein and Parlar, Ayhan and Torabfam, Milad and Koşar, Ali and Yüce, Meral and Ghorbani, Morteza (2020) Influence of fluid properties on intensity of hydrodynamic cavitation and deactivation of salmonella typhimurium. Processes, 8 (3). ISSN 2227-9717

Temel, Sehime Gulsun and Giray, Aslı and Karakaş, Bahriye and Gul, Ozgur and Kozanoglu, Ilknur and Celik, Husnu and Başağa, Hüveyda and Acikbas, Ufuk and Sucularli, Ceren and Oztop, Sidika and Aka, Yeliz and Kutuk, Ozgur (2020) RAB25 confers resistance to chemotherapy by altering mitochondrial apoptosis signaling in ovarian cancer cells. Apoptosis, 25 (11-12). pp. 799-816. ISSN 1360-8185 (Print) 1573-675X (Online)

Tepeli, Yasin İlkağan and Ünal, Ali Burak and Akdemir, Mustafa Furkan and Taştan, Öznur (2020) PAMOGK: A pathway graph kernel based multi-omics clustering approach for discovering cancer patient subgroups. In: Satellite Workshop on Computational Cancer Biology (RECOMB-CCB) - Jointly with RECOMB 2020, Virtual

V

Vural, Sümeyra (2020) Method development and optimization for nucleic acid detection platforms. [Thesis]

Y

Yetişgin, Abuzer Alp and Çetinel, Sibel and Zuvin, Merve and Koşar, Ali and Kutlu, Özlem (2020) Therapeutic nanoparticles and their targeted delivery applications. Molecules, 25 (9). ISSN 1420-3049

Yılmaz, Nihat and Çetiner, Selim and Ortaş, İbrahim (2020) The effects of the mycorrhiza on plant growth during acclimatization of some in vitro grown sweet cherry rootstocks. International Journal of Agricultural and Natural Sciences, 13 (1). pp. 10-19. ISSN 2651-3617

Z

Zhang, Baige and Çakmak, İsmail and Feng, Jianchun and Yu, Chaoran and Chen, Xiao and Xie, Dasen and Wu, Liangquan and Song, Zhao and Cao, Jian and He, Yuzhi (2020) Magnesium deficiency reduced the yield and seed germination in wax gourd by affecting the carbohydrate translocation. Frontiers in Plant Science, 11 . ISSN 1664-462X (Print)

Ç

Çakır, Hatice (2020) Analysis of the crosstalk between cancer-associated fibroblasts and tumor cells in hepatocellular carcinoma. [Thesis]

Çakmak, İsmail and Marzorati, Massimo and Van den Abbeele, Pieter and Hora, Katja and Holwerda, Harmen Tjalling and Yazıcı, Mustafa Atilla and Savaşlı, Erdinç and Neri, Joachim and Du Laing, Gijs (2020) Fate and bioaccessibility of iodine in food prepared from agronomically biofortified wheat and rice and impact of cofertilization with zinc and selenium. Journal of Agricultural and Food Chemistry, 68 (6). pp. 1525-1535. ISSN 0021-8561 (Print) 1520-5118 (Online)

Çelebi Torabfam, Gizem and Kesim, Hale and Özer, Ebru and Kutlu, Özlem (2020) The effect of dysfunctional ubiquitin enzymes in the pathogenesis of most common diseases. International Journal of Molecular Sciences, 21 (17). ISSN 1661-6596 (Print) 1422-0067 (Online)

Çetin, Arda (2020) Epigenetic determinations of nucleotide excision repair efficiency. [Thesis]

Çokol Çakmak, Melike and Çetiner, Selim and Erdem, Nurdan and Bakan, Feray and Çokol, Murat (2020) Guided screen for synergistic three-drug combinations. PLoS One, 15 (7). ISSN 1932-6203

Ö

Özkazanç Ünsal, Didem (2020) Development of a novel in vitro screening method using genetically modified NK-92 cells against various tumor cells. [Thesis]