Items where Subject is "QR Microbiology"

A

Ammann, Klaus (2009) Why farming with high tech methods should integrate elements of organic agriculture. New Biotechnology, 25 (6). pp. 378-388. ISSN 1871-6784

Anbar, Michael and Gül, Özgür and Lamed, Raphael and Sezerman, Uğur and Bayer, Edward A. (2012) Improved thermostability of clostridium thermocellum endoglucanase Cel8A by using consensus-guided mutagenesis. Applied and Environmental Microbiology, 78 (9). pp. 3458-3464. ISSN 0099-2240 (print) ; 1098-5336 (online)

B

Başaran, Necdet and Kızıltaş, Güllü (2012) Fabrication of polymer-ceramic composite bone scaffolds with controlled multi-scale porosity.

Bayram, Z. and Bozdemir, T. and Durusoy, T. and Yürüm, Yuda (1999) Biodesulphurization of mengen lignite by Rhodoccocus rhodochrous in a batch stirred and aerated tank fermenter. Acta Biotechnologica, 19 (4). pp. 307-318. ISSN 0138-4988

Bayram Akçapınar, Günseli and Gül, Özgür and Sezerman, Uğur (2011) Effect of codon optimization on the expression of trichoderma reesei endoglucanase 1 in pichia pastoris. Biotechnology Progress, 27 (5). pp. 1257-1263. ISSN 8756-7938

Biçen, Ozan and Lehtomaki, Janne J. and Akyıldız, Ian F. (2020) Statistical modeling and bit error rate analysis for bio-sensor receivers in molecular communication. IEEE Sensors Journal, 20 (1). pp. 261-268. ISSN 1530-437X (Print) 1558-1748 (Online)

Bilecen, Kıvanç and Öztürk, Ümit Hasan and Duru, Adil Doğanay and Sütlü, Tolga and Petoukhov, Maxim V. and Svergun, Dimitri I. and Koch, Michel H. J. and Sezerman, Uğur and Çakmak, İsmail and Sayers, Zehra (2005) Triticum durum metallothionein: isolation of the gene and structural characterization of the protein using solution scattering and molecular modeling. Journal of Biological Chemistry, 280 (14). pp. 13701-13711. ISSN 0021-9258 (Print) 1083-351X (Online)

Budak, Hikmet and Akpınar, Bala Anı (2011) Dehydration stress-responsive miRNA in brachypodium distachyon: evident by genome-wide screening of microRNAs expression. OMICS: A Journal of Integrative Biology, 15 (11). pp. 791-799. ISSN 1536-2310

Bulusu, Krishna C. and Guha, Rajarshi and Mason, Daniel J. and Lewis, Richard P. I. and Muratov, Eugene and Motamedi, Yasaman Kalantar and Çokol, Murat and Bender, Andreas (2015) Modelling of compound combination effects and applications to efficacy and toxicity: state-of-the-art, challenges and perspectives. Drug Discovery Today . ISSN 1359-6446 (Print) 1878-5832 (Online) Published Online First http://dx.doi.org/10.1016/j.drudis.2015.09.003

C

Ceyhan, Ceran and Çokol, Murat and Cingöz, Sultan and Taşan, İpek and Öztürk, Mehmet and Yağcı, Tamer (2012) Novel anti-HER2 monoclonal antibodies: synergy and antagonism with tumor necrosis factor alpha. BMC Cancer, 12 . ISSN 1471-2407 (Print) 1471-2407 (Online)

Chouhan, Raghuraj Singh and Kolkar Mohammed, Javed Hussain Niazi and Qureshi, Anjum (2014) Chemical toxicity detection using quantum dot encoded E. coli cells. Sensors and Actuators B: Chemical, 196 . pp. 381-387. ISSN 0925-4005

Chouhan, Raghuraj Singh and Kolkar Mohammed, Javed Hussain Niazi and Qureshi, Anjum (2013) Quantum dots conjugated E. coli living cells as fluorescent reporters to detect cytotoxicity of chemicals. In: The Sixth International Exergy, Energy and Environment Symposium, IEEES-6, 1-4 June 2013, Rize, Turkey, Rize, Turkey (Accepted)

Chouhan, Raghuraj Singh and Pandey, Ashish and Qureshi, Anjum and Özgüz, Volkan Hüsnü and Kolkar Mohammed, Javed Hussain Niazi (2016) Nanomaterial resistant microorganism mediated reduction of graphene oxide. Colloids and Surfaces B: Biointerfaces, 146 . pp. 39-46. ISSN 0927-7765 (Print) 1873-4367 (Online)

Chouhan, Raghuraj Singh and Qureshi, Anjum and Kolkar Mohammed, Javed Hussain Niazi (2015) Determining the fate of fluorescent quantum dots on surface of engineered budding S. cerevisiae cell molecular landscape. Biosensors and Bioelectronics, 69 . pp. 26-33. ISSN 0956-5663 (Print) 1873-4235 (Online)

Chouhan, Raghuraj Singh and Qureshi, Anjum and Yağcı, Barış and Gülgün, Mehmet Ali and Özgüz, Volkan Hüsnü and Kolkar Mohammed, Javed Hussain Niazi (2016) Biotransformation of multi-walled carbon nanotubes mediated by nanomaterial resistant soil bacteria. Chemical Engineering Journal, 298 . pp. 1-9. ISSN 1385-8947 (Print) 1873-3212 (Online)

E

Erman, Batu and Alag, Amala S. and Dahle, Oyvind and Laethem, François van and Sarafova, Sophia D. and Guinter, Terry I. and Sharrow, Susan O. and Grinberg, Alexander and Love, Paul E. and Singer, Alfred (2006) Coreceptor signal strength regulates positive selection but does not determine CD4/CD8 lineage choice in a physiologic in vivo model. Journal of Immunology, 177 (10). pp. 6613-6625. ISSN 0022-1767

G

Gonsalvesh, L. and Marinov, S.P. and Stefanova, M. and Yürüm, Yuda and Dumanlı, Ahu Gümrah and Dinler-Doğanay, Gizem and Kolankaya, N. and Sam, M. and Carleer, R. and Reggers, G. and Thijssen, E. and Yperman, J. (2008) Biodesulphurized subbituminous coal by different fungi and bacteria studied by reductive pyrolysis. Part 1: Initial coal. Fuel, 87 (12). pp. 2533-2543. ISSN 0016-2361

K

Kızıltaş, Güllü and Başaran, Necdet (2012) Level set based design optimization framework for active scaffolds.

Kolkar Mohammed, Javed Hussain Niazi and Sang, Byoung-In and Kim, Yeon Seok and Gu, Man Bock (2011) Global gene response in saccharomyces cerevisiae exposed to silver nanoparticles. Applied Biochemistry and Biotechnology, 164 (8). pp. 1278-1291. ISSN 0273-2289 (Print) 1559-0291 (Online)

Korkut, Senay Vural and Altınışık, Başak Çelik and Sezerman, Uğur and Meydan, Cem (2011) Cloning of hordeum spontenaum genes which are expressed upon zinc deficiency using suppressed sub-stractive hybridization method. In: European Biotechnology Congress, Istanbul, Turkey

M

Mullens, S. and Yperman, J. and Carleer, R. and Bozdemir, T. and Durusoy, T. and Yürüm, Yuda (2005) Sulfur analysis of Bolu-Mengen lignite before and after microbiological treatment using reductive pyrolysis and gas chromatography/mass spectrometry. Energy & Fuels, 19 (3). pp. 1029-1036. ISSN 0887-0624

P

Pandey, Ashish and Chouhan, Raghuraj Singh and Gürbüz, Yaşar and Kolkar Mohammed, Javed Hussain Niazi and Qureshi, Anjum (2015) S. cerevisiae whole-cell based capacitive biochip for the detection of toxicity of different forms of carbon nanotubes. Sensors and Actuators B: Chemical, 218 . pp. 253-260. ISSN 0925-4005

Pandey, Ashish and Gürbüz, Yaşar and Özgüz, Volkan Hüsnü and Kolkar Mohammed, Javed Hussain Niazi and Qureshi, Anjum (2017) Graphene-interfaced electrical biosensor for label-free and sensitive detection of foodborne pathogenic E. coli O157:H7. Biosensors and Bioelectronics, 91 . pp. 225-231. ISSN 0956-5663 (Print) 1873-4235 (Online)

Pandey, Ashish and Gürbüz, Yaşar and Özgüz, Volkan Hüsnü and Kolkar Mohammed, Javed Hussain Niazi and Qureshi, Anjum (2017) Probing synergistic toxicity effects on living cells by combination of two different sized nanoparticles by a whole-cell based biochip. In: International Conference on Advancements in Aeromechanical Materials for Manufacturing (ICAAMM), MLR Institute of Technology, Hyderabad, Telangana, India

Q

Qureshi, Anjum and Kolkar Mohammed, Javed Hussain Niazi and Kallempudi, Sreenivasa Saravan and Gürbüz, Yaşar (2010) Label-free capacitive biosensor for sensitive detection of multiple biomarkers using gold interdigitated capacitor arrays. Biosensors and Bioelectronics, 25 (10). pp. 2318-2323. ISSN 0956-5663

Qureshi, Anjum and Roci, Irena and Gürbüz, Yaşar and Kolkar Mohammed, Javed Hussain Niazi (2012) An aptamer based competition assay for protein detection using CNT activated gold-interdigitated capacitor arrays. Biosensors and Bioelectronics, 34 (1). pp. 165-170. ISSN 0956-5663

S

Sarafova, Sophia D. and Erman, Batu and Yu, Qing and Van Laethem, François and Guinter, Terry and Sharrow, Susan O. and Feigenbaum, Lionel and Wildt, Kathryn F. and Ellmeier, Wilfried and Singer, Alfred (2005) Modulation of coreceptor transcription during positive selection dictates lineage fate independently of TCR/coreceptor specificity. Immunity, 23 (1). pp. 75-87. ISSN 1074-7613

T

Tansık, Gülistan and Kılıç, Erden and Beter, Mustafa and Demiralp, Bahtiyar and Kızıltaş, Güllü and Can, Nuray and Özkan, Hüseyin and Ergül, Elif and Güler, Mustafa O. and Tekinay, Ayşe B. (2016) A glycosaminoglycan mimetic peptide nanofiber gel as an osteoinductive scaffold. Biomaterials Science, 4 (9). pp. 1328-1339. ISSN 2047-4830 (Print) 2047-4849 (Online)

U

Uzbaş, Fatma and Sezerman, Uğur and Hartl, Lukas and Kubicek, Christian P. and Seiboth, Bernhard (2012) A homologous production system for Trichoderma reesei secreted proteins in a cellulase-free background. Applied Microbiology and Biotechnology, 93 (4). pp. 1601-1608. ISSN 0175-7598 (print) ; 1432-0614 (online)

Y

Yu, Qing and Park, Jung-Hyun and Doan, Loretta L. and Erman, Batu and Feigenbaum, Lionel and Singer, Alfred (2006) Cytokine signal transduction is suppressed in preselection double-positive thymocytes and restored by positive selection. Journal of experimental medicine, 203 (1). pp. 165-175. ISSN 0022-1007

Yüce, Meral and Kurt, Hasan and Hussain, Babar and Ow-Yang, Cleva W. and Budak, Hikmet (2018) Exploiting stokes and anti-stokes type emission profiles of aptamer-functionalized luminescent nanoprobes for multiplex sensing applications. Chemistry Select, 3 (21). pp. 5814-5823. ISSN 2365-6549

Ç

Çokol, Murat and Chua, Hon Nian and Taşan, Murat and Mutlu, Beste and Weinstein, Zohar Bat-El and Suzuki, Yo and Nergiz, Mehmet E. and Costanzo, Michael and Baryshnikova, Anastasia and Giaever, Guri and Nislow, Corey and Myers, Chad L. and Andrews, Brenda J. and Boone, Charles and Roth, Frederick P. (2011) Systematic exploration of synergistic drug pairs. Molecular Systems Biology, 7 . ISSN 1744-4292

Çokol Çakmak, Melike and Çetiner, Selim and Erdem, Nurdan and Bakan, Feray and Çokol, Murat (2020) Guided screen for synergistic three-drug combinations. PLoS One, 15 (7). ISSN 1932-6203

Çürük, Sabahattin and Çetiner, Selim and Elman, C. and Xia, X. and Wang, Y. and Yeheskel, A. and Zilberstein, L. and Perl-Treves, R. and Watad, A. A. and Gaba, V. (2005) Transformation of recalcitrant melon (cucumis melo L.) cultivars is facilitated by wounding with carborundum. Engineering in Life Sciences, 5 (2). pp. 169-177. ISSN 1618-0240

Ö

Özcan, Bahri Devrim and Baylan, Makbule and Özcan, Numan and Tekdal, Dilek (2010) Characterization of thermostable α-amylase from thermophilic andAlkaliphilic bacillus sp. isolate DM-15. Research Journal of Biological Sciences, 5 (1). pp. 118-124. ISSN 1815-8846 (Print) 1993-6087 (Online)