Items where Author is "Kaya, Kamer"

Article

Rafiei Anamagh, Mirmeysam and Gokalp, Kaya and Akyıldız, Taha Atahan and Alan, Salih and Kaya, Kamer and Bediz, Bekir (2023) A hybrid CPU–GPU solver based on three-dimensional spectral Chebyshev technique for determining the dynamic behavior of thick sandwich panels. Engineering Analysis with Boundary Elements, 147 . pp. 181-194. ISSN 0955-7997 (Print) 1873-197X (Online)

Alabsi Aljundi, Amro and Akyıldız, Taha Atahan and Kaya, Kamer (2022) Boosting graph embedding on a single GPU. IEEE Transactions on Parallel and Distributed Systems, 33 (11). pp. 3092-3105. ISSN 1045-9219 (Print) 1558-2183 (Online)

Abdennebi, Anes and Elakaş, Anıl and Taşyaran, Fatih and Öztürk, Erdinç and Kaya, Kamer and Yıldırım, Sinan (2022) Machine learning-based load distribution and balancing in heterogeneous database management systems. Concurrency and Computation: Practice and Experience, 34 (4). ISSN 1532-0626 (Print) 1532-0634 (Online)

Dufossé, Fanny and Kaya, Kamer and Panagiotas, Ioannis and Uçar, Bora (2022) Scaling matrices and counting the perfect matchings in graphs. Discrete Applied Mathematics (SI), 308 . pp. 130-146. ISSN 0166-218X (Print) 1872-6771 (Online)

Taş, Mustafa Kemal and Kaya, Kamer and Yenigün, Hüsnü (2021) Synchronizing billion-scale automata. Information Sciences, 574 . pp. 162-175. ISSN 0020-0255 (Print) 1872-6291 (Online)

Göktürk, Gökhan and Kaya, Kamer (2021) Boosting parallel influence-maximization Kernels for undirected networks with fusing and vectorization. IEEE Transactions on Parallel and Distributed Systems, 32 (5). pp. 1001-1013. ISSN 1045-9219 (Print) 1558-2183 (Online)

Saraç, N. Ege and Altun, Ömer Faruk and Atam, Kamil Tolga and Karahoda, Sertaç and Kaya, Kamer and Yenigün, Hüsnü (2021) Boosting expensive synchronizing heuristics. Expert Systems with Applications, 167 . ISSN 0957-4174 (Print) 1873-6793 (Online)

Karahoda, Sertaç and Erenay, Osman Tufan and Kaya, Kamer and Türker, Uraz Cengiz and Yenigün, Hüsnü (2020) Multicore and manycore parallelization of cheap synchronizing sequence heuristics. Journal of Parallel and Distributed Computing, 140 . pp. 13-24. ISSN 0743-7315 (Print) 1096-0848 (Onilne)

Mercan, Hanefi and Yılmaz, Cemal and Kaya, Kamer (2019) CHiP: a configurable hybrid parallel covering array constructor. IEEE Transactions on Software Engineering, 45 (12). pp. 1270-1291. ISSN 0098-5589 (Print) 1939-3520 (Online)

Kaya, Kamer (2019) Parallel algorithms for computing sparse matrix permanents. Turkish Journal of Electrical Engineering and Computer Sciences, 27 (6). pp. 4284-4297. ISSN 1300-0632 (Print) 1303-6203 (Online)

Herrmann, Julien and Özkaya, M. Yusuf and Uçar, Bora and Kaya, Kamer and Çatalyürek, Ümit V. (2019) Multilevel algorithms for acyclic partitioning of directed acyclic graphs. SIAM Journal on Scientific Computing, 41 (4). A2117-A2145. ISSN 1064-8275 (Print) 1095-7197 (Online)

Kaya, Kamer and Öztoprak, Figen and Birbil, Ş. İlker and Cemgil, A. Taylan and Şimşekli, Umut and Kuru, Nurdan and Koptagel, Hazal and Öztürk, Mehmet Kaan (2019) A framework for parallel second order incremental optimization algorithms for solving partially separable problems. Computational Optimization and Applications, 72 (3). pp. 675-705. ISSN 0926-6003 (Print) 1573-2894 (Online)

Topcuoğlu, Cem and Kaya, Kamer and Savaş, Erkay (2018) A generic private information retrieval scheme with parallel multi-exponentiations on multicore processors. Concurrency and Computation: Practice and Experience (SI), 30 (21). ISSN 1532-0626 (Print) 1532-0634 (Online)

Mumcuyan, Aras and Usta, Baran and Kaya, Kamer and Yenigün, Hüsnü (2018) Optimally bipartitioning sparse matrices with reordering and parallelization. Concurrency and Computation: Practice and Experience (SI), 30 (21). ISSN 1532-0626 (Print) 1532-0634 (Online)

Dufossé, Fanny and Kaya, Kamer and Panagiotas, Ioannis and Uçar, Bora (2018) Further notes on Birkhoff-von Neumann decomposition of doubly stochastic matrices. Linear Algebra and Its Applications, 554 . pp. 68-78. ISSN 0024-3795 (Print) 1873-1856 (Online)

Karahoda, Sertaç and Kaya, Kamer and Yenigün, Hüsnü (2018) Synchronizing heuristics: speeding up the fastest. Expert Systems with Applications, 94 . pp. 265-275. ISSN 0957-4174 (Print) 1873-6793 (Online)

Şentürk, İzzet F. and Balakrishnan, P. and Abu-Doleh, Anas and Kaya, Kamer and Malluhi, Qutaibah and Çatalyürek, Ümit V. (2018) A resource provisioning framework for bioinformatics applications in multi-cloud environments. Future Generation Computer Systems, 78 (Part1). pp. 379-391. ISSN 0167-739X (Print) 1872-7115 (Online)

Tillem, Gamze and Savaş, Erkay and Kaya, Kamer (2017) A new method for computational private information retrieval. Computer Journal, 60 (8). pp. 1238-1250. ISSN 0010-4620 (Print) 1460-2067 (Online)

Sarıyüce, Ahmet Erdem and Kaya, Kamer and Saule, Erik and Çatalyürek, Ümit V. (2017) Graph manipulations for fast centrality computation. ACM Transactions on Knowledge Discovery from Data, 11 (3). ISSN 1556-4681 (Print) 1556-472X (Online)

Ersoy, Oğuzhan and Pedersen, Thomas Brochmann and Kaya, Kamer and Selçuk, Ali Aydın and Anarim, Emin (2016) A CRT-based verifiable secret sharing scheme secure against unbounded adversaries. (Accepted)

Janies, Daniel A. and Pomeroy, Laura W. and Krueger, Chris and Zhang, Yuqi and Şentürk, İzzet F. and Kaya, Kamer and Çatalyürek, Ümit V. (2015) Phylogenetic visualization of the spread of H7 influenza A viruses. Cladistics, 31 (6). pp. 679-691. ISSN 0748-3007 (Print) 1096-0031 (Online)

Sarıyüce, Ahmet Erdem and Saule, Erik and Kaya, Kamer and Çatalyürek, Ümit V. (2015) Incremental closeness centrality in distributed memory. Parallel Computing (SI), 47 . pp. 3-18. ISSN 0167-8191 (Print) 1872-7336 (Online)

Deveci, Mehmet and Kaya, Kamer and Uçar, Bora and Çatalyürek, Ümit V. (2015) Hypergraph partitioning for multiple communication cost metrics: model and methods. Journal of Parallel and Distributed Computing, 77 . pp. 69-83. ISSN 0743-7315 (Print) 1096-0848 (Onilne)

Papers in Conference Proceedings

Akpinar, Sila and Vardar, Emre and Yeşilyurt, Serhat and Kaya, Kamer (2023) Solving Navier-Stokes equations with mixed equation physics informed neural networks [Navier-Stokes denklemlerinin karma denklemli fizik bilgili nöral ağlarla çözümü]. In: 31st Signal Processing and Communications Applications Conference (SIU), Istanbul, Turkiye

Tezcan, Erhan and Torun, Tugba and Kosar, Fahrican and Kaya, Kamer and Unat, Didem (2022) Mixed and multi-precision SpMV for GPUs with row-wise precision selection. In: IEEE 34th International Symposium on Computer Architecture and High Performance Computing (SBAC-PAD), Bordeaux, France

Alabsi Aljundi, Amro and Akyıldız, Taha Atahan and Kaya, Kamer (2022) Degree-aware Kernels for computing Jaccard weights on GPUs. In: IEEE International Parallel and Distributed Processing Symposium (IPDPS), Lyon, France

Göktürk, Gökhan and Kaya, Kamer (2022) Fast and high-quality influence maximization on multiple GPUs. In: IEEE International Parallel and Distributed Processing Symposium (IPDPS), Lyon, France

Canito, Alda and Fernandes, Marta and Mourinho, Joao and Tosun, Serkan and Kaya, Kamer and Turupcu, Ayşegül and Lagares, Angel and Karabulut, Huseyin and Marreiros, Goreti (2021) Flexible architecture for data-driven predictive maintenance with support for offline and online machine learning techniques. In: 47th Annual Conference of the IEEE Industrial Electronics Society (IECON), Toronto, ON, Canada

Yıldırım, Sinan and Kaya, Kamer and Aydın, Soner and Erentuğ, Hakan Buğra (2020) Differentially private frequency sketches for intermittent queries on large data streams. In: IEEE International Conference on Big Data (Big Data), Atlanta, GA, USA

Akyıldız, Taha Atahan and Alabsi Aljundi, Amro and Kaya, Kamer (2020) Understanding coarsening for embedding large-scale graphs. In: IEEE International Conference on Big Data (Big Data), Atlanta, GA, USA

Kaya, Kamer and Demirel, Berker and Topal, Barış Batuhan and Aşık, Arda and Demir, İbrahim Buğra (2020) Vertex ordering algorithms for graph coloring problem [Çizge renklendirme problemi için nokta sıralama algoritmaları]. In: 28th Signal Processing and Communications Applications Conference (SIU), Gaziantep, Turkey

Akyıldız, Taha Atahan and Alabsi Aljundi, Amro and Kaya, Kamer (2020) GOSH: embedding big graphs on small hardware. In: 49th International Conference on Parallel Processing (ICPP 2020), Virtual

Kaya, Kamer and Langguth, Johannes and Panagiotas, Ioannis and Uçar, Bora (2020) Karp-Sipser based kernels for bipartite graph matching. In: Algorithm Engineering and Experiments (ALENEX 2020), Hilton Salt Lake City Center, Salt Lake City, Utah, U.S.

Dufossé, Fanny and Kaya, Kamer and Panagiotas, Ioannis and Uçar, Bora (2019) Effective heuristics for matchings in hypergraphs. In: Special Event on Analysis of Experimental Algorithms, SEA² 2019, Kalamata, Greece

Taşyaran, Fatih and Yıldırır, Kerem and Taş, Mustafa Kemal and Kaya, Kamer (2019) One table to count them all: parallel frequency estimation on single-board computers. In: 25th International European Conference on Parallel and Distributed Computing, Euro-Par 2019, Göttingen, Germany

Çirişci, Berk and Sevilmiş, Barış and Sivri, Emre Yasin and Karaçam, Poyraz Kıvanç and Kaya, Kamer and Yenigün, Hüsnü (2019) Synchronizing heuristics for weakly connected automata with various topologies. In: 6th International Conference on Model-Driven Engineering and Software Development (MODELSWARD 2018), Funchal, Madeira, Portugal

Çirişci, Berk and Emek, M. Yuşa and Sorguç, Ege and Kaya, Kamer and Yenigün, Hüsnü (2019) Using synchronizing heuristics to construct homing sequences. In: 7th International Conference on Model-Driven Engineering and Software Development (MODELSWARD 2019), Prague, Czech Republic

Mercan, Hanefi and Kaya, Kamer and Yılmaz, Cemal (2018) Enumerator: an efficient approach for enumerating all valid t-tuples. In: 11th IEEE International Conference on Software Testing, Verification and Validation Workshops (ICSTW 2018), Vasteras, Sweden

Taş, Mustafa Kemal and Mercan, Hanefi and Demiröz, Gülşen and Kaya, Kamer and Yılmaz, Cemal (2018) Generating cost-aware covering arrays for free. In: 4th International Conference on Tools and Methods of Program Analysis (TMPA 2017), Moscow, Russia

Kaya, Kamer and Birbil, Ş. İlker and Öztürk, Mehmet Kaan and Emami Gohari, Amir (2018) Parallelized preconditioned model building algorithm for matrix factorization. In: 3rd International Conference on Machine Learning, Optimization, and Big Data, MOD 2017, Volterra, Italy

Çirişci, Berk and Kahraman, Muhammed Kerem and Yıldırımoğlu, Çağrı Uluç and Kaya, Kamer and Yenigün, Hüsnü (2018) Using structure of automata for faster synchronizing heuristics. In: 6th International Conference on Model-Driven Engineering and Software Development (MODELSWARD 2018), Funchal, Madeira, Portugal

Topçuoğlu, Cem and Kaya, Kamer and Savaş, Erkay (2017) Multi-exponentiations on multi-cores. In: 5. Ulusal Yüksek Başarımlı Hesaplama Konferansı (BAŞARIM 2017), İstanbul, Türkiye (Accepted)

Mumcuyan, Aras and Kaya, Kamer and Yenigün, Hüsnü (2017) Reordering matrices for optimal sparse matrix bipartitioning. In: 5. Ulusal Yüksek Başarımlı Hesaplama Konferansı (BAŞARIM 2017), İstanbul, Türkiye (Accepted)

Mercan, Hanefi and Yılmaz, Cemal and Kaya, Kamer (2017) An approach for choosing the best covering array constructor to use. In: IEEE International Conference on Software Quality, Reliability and Security Companion (QRS-C 2017), Prague, Czech Republic

Altun, Ömer Faruk and Atam, Kamil Tolga and Karahoda, Sertaç and Kaya, Kamer (2017) Synchronizing heuristics: speeding up the slowest. In: The 29th IFIP International Conference on Testing Software and Systems, St-Petersburg (Accepted)

Herrmann, Julien and Kho, Jonathan and Uçar, Bora and Kaya, Kamer and Çatalyürek, Ümit (2017) Acyclic partitioning of large directed acyclic graphs. In: 17th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing (CCGRID 2017), Madrid, Spain

Taş, Mustafa Kemal and Kaya, Kamer and Saule, Erik (2017) Greed is good: parallel algorithms for bipartite-graph partial coloring on multicore architectures. In: 46th International Conference on Parallel Processing (ICPP 2017), Bristol, UK (Accepted)

Karahoda, Sertaç and Erenay, Osman Tufan and Kaya, Kamer and Türker, Uraz Cengiz and Yenigün, Hüsnü (2016) Parallelizing heuristics for generating synchronizing sequences. In: 28th IFIP WG 6.1 International Conference on Testing Software and Systems (ICTSS 2016), Graz, Austria

Tillem, Gamze and Candan, Ömer Mert and Savaş, Erkay and Kaya, Kamer (2016) Hiding access patterns in range queries using private information retrieval and ORAM. In: International Workshops on Financial Cryptography and Data Security, Christ Church, Barbados

Ersoy, Ersin and Kaya, Kamer and Altınışık, Metin and Sözer, Hasan (2016) Using hypergraph clustering for software architecture reconstruction of data-tier software. In: 10th European Conference Software Architecture, Copenhagen, Denmark (Accepted)

Deveci, Mehmet and Kaya, Kamer and Uçar, Bora and Çatalyürek, Ümit V. (2015) Fast and high quality topology-aware task mapping. In: 29th IEEE International Parallel and Distributed Processing Symposium (IPDPS 2015), Hyderabad, India

Hatem, Ayat and Kaya, Kamer and Parvin, Jeffrey and Huang, Kun and Çatalyürek, Ümit (2015) MICA: microRNA integration for active module discovery. In: 6th ACM Conference on Bioinformatics, Computational Biology and Health Informatics, Atlanta, GA

Working Paper / Technical Report

Dufossé, Fanny and Kaya, Kamer and Panagiotas, Ioannis and Uçar, Bora (2018) Scaling matrices and counting the perfect matchings in graphs. [Working Paper / Technical Report] Sabanci University ID:9161

Herrmann, Julien and Özkaya, M. Yusuf and Uçar, Bora and Kaya, Kamer and Çatalyürek, Ümit V. (2018) Acyclic partitioning of large directed acyclic graphs. [Working Paper / Technical Report] Sabanci University ID:9163

Ersoy, Oğuzhan and Kaya, Kamer and Kaşkaloğlu, Kerem (2016) Multilevel threshold secret and function sharing based on the Chinese remainder theorem. [Working Paper / Technical Report] Sabanci University ID:UNSPECIFIED

Deveci, Mehmet and Kaya, Kamer and Uçar, Bora and Çatalyürek, Ümit V. (2014) Hypergraph partitioning for multiple communication cost metrics: model and methods. [Working Paper / Technical Report] Sabanci University ID:UNSPECIFIED

Sarıyüce, Ahmet Erdem and Saule, Erik and Kaya, Kamer and Çatalyürek, Ümit V. (2014) Incremental closeness centrality in distributed memory. [Working Paper / Technical Report] Sabanci University ID:UNSPECIFIED

Deveci, Mehmet and Kaya, Kamer and Uçar, Bora and Çatalyürek, Ümit V. (2014) Fast and high quality topology-aware task mapping. [Working Paper / Technical Report] Sabanci University ID:UNSPECIFIED

Sarıyüce, Ahmet Erdem and Kaya, Kamer and Saule, Erik and Çatalyürek, Ümit V. (2014) Graph manipulations for fast centrality computation. [Working Paper / Technical Report] Sabanci University ID:UNSPECIFIED

Book Section / Chapter

Deveci, Mehmet and Küçüktunç, Onur and Eren, Kemal and Bozdağ, Doruk and Kaya, Kamer and Çatalyürek, Ümit (2015) Querying co-regulated genes on diverse gene expression datasets via biclustering. In: Guzzi, Pietro Hiram, (ed.) Microarray Data Analysis. Methods in Molecular Biology. Humana Press, New York, NY, USA. (Accepted)