Items where Division is "Biological Sciences & Bio Eng." and Year is 2019

A

Akkoç, Yunus and Lyubenova, Lyudmila Slaveykova and Grausgruber, Heinrich and Janovská, Dagmar and Yazıcı, Mustafa Atilla and Çakmak, İsmail and Gözüaçık, Devrim (2019) Minor cereals exhibit superior antioxidant effects on human epithelial cells compared to common wheat cultivars. Journal of Cereal Science, 85 . pp. 143-152. ISSN 0733-5210 (Print) 1095-9963 (Online)

Alpugan, Serkan and Topkaya, Derya and Verma, Sandeep Kumar and Atilla, Devrim and Ahsen, Vefa and Kolkar Mohammed, Javed Hussain Niazi and Dumoulin, Fabienne (2019) Corrigendum to: Zn phthalocyanine conjugation to H2-ul aptamer for HER2-targeted breast cancer photodynamic therapy: Design, optimization and properties (J. Porphyrins Phthalocyanines (2017) 21 (887-892) DOI: 10.1142/S1088424617500973). Journal of Porphyrins and Phthalocyanines, 23 (3). p. 303. ISSN 1088-4246 (Print) 1099-1409 (Online)

Asif, Muhammad and Tunç, Cevza Esin and Yazıcı, Mustafa Atilla and Tutuş, Yusuf and Rehman, Raheela and Rehman, Abdul and Öztürk, Levent (2019) Effect of predicted climate change on growth and yield performance of wheat under varied nitrogen and zinc supply. Plant and Soil, 434 (1-2). pp. 231-244. ISSN 0032-079X (Print) 1573-5036 (Online)

Asif, Muhammad and Zora, Seray and Öztürk, Levent (2019) Interactive effect of elevated carbon dioxide and nitrogen sources on wheat plants. In: Innovations in Agriculture: Nourishing Pakistan in Changing Climate, Faisalabad, Pakistan

Askar, Yimit and Adebali, Ogün and Sancar, Aziz and Jiang, Yuchao (2019) Differential damage and repair of DNA-adducts induced by anti-cancer drug cisplatin across mouse organs. Nature Communicaitons, 10 (1). ISSN 2041-1723

B

Batuman, Ozgur and Çiftçi, Özgün Cem and Osei, Michael K. and Miller, Sally A. and Rojas, Maria R. and Gilbertson, Robert L. (2019) Rasta disease of tomato in ghana is caused by the pospiviroids Potato spindle tuber viroid and Tomato apical stunt viroid. Plant Disease, 103 (7). pp. 1525-1535. ISSN 0191-2917 (Print) 1943-7692 (Online)

Bonjoch, Laia and Mur, Pilar and Arnau-Collell, Coral and Vargas-Parra, Gardenia and Shamloo, Bahar and Franch-Expósito, Sebastià and Pineda, Marta and Capellà, Gabriel and Erman, Batu and Castellví-Bel, Sergi (2019) Approaches to functionally validate candidate genetic variants involved in colorectal cancer predisposition. Molecular Aspects of Medicine, 69 . pp. 27-40. ISSN 0098-2997 (Print) 1872-9452 (Online)

Broadrup, Robert L. and Mayack, Christopher and Schick, Sassicaia J. and Eppley, Elizabeth J. and White, Helen K. and Macherone, Anthony (2019) Honey bee (Apis mellifera) exposomes and dysregulated metabolic pathways associated with Nosema ceranae infection. PLoS One, 14 (3). ISSN 1932-6203

Bülbül, Gonca and Liu, Gökşin and Vithalapur, Namrata Rao and Atılgan, Canan and Sayers, Zehra and Pourmand, Nader (2019) Employment of iron-binding protein from Haemophilus influenzae in functional nanopipettes for iron monitoring. ACS Chemical Neuroscience (SI), 10 (4). pp. 1970-1977. ISSN 1948-7193 (Print) 1948-7193 (Online)

C

Chrobok, Michael and Dahlberg, Carin I. M. and Sayitoğlu, Ece Canan and Beljanski, Vladimir and Nahi, Hareth and Gilljam, Mari and Stellan, Birgitta and Sütlü, Tolga and Duru, Adil Doğanay and Alıcı, Evren (2019) Functional assessment for clinical use of serum-free adapted NK-92 cells. Cancers, 11 (1). ISSN 2072-6694

D

Demir Duman, Fatma and Akkoç, Yunus and Demirci, Gözde and Bavili, Nima and Kiraz, Alper and Gözüaçık, Devrim and Yağcı-Acar, Havva Funda (2019) Bypassing pro-survival and resistance mechanisms of autophagy in EGFR-positive lung cancer cells by targeted delivery of 5FU using theranostic Ag2S quantum dots. Journal of Materials Chemistry B, 7 (46). pp. 7363-7376. ISSN 2050-750X (Print) 2050-7518 (Online)

Deretic, Vojo and Prossnitz, Eric and Burge, Mark and Campen, Matthew J. and Cannon, Judy and Liu, Ke Jian and Liu, Meilian and Hall, Pamela and Sklar, Larry A. and Allers, Lee and Mariscal, Luisa and Garcia, Sally Ann and Weaver, John and Baehrecke, Eric H. and Behrends, Christian and Cecconi, Francesco and Codogno, Patrice and Chen, Guang Chao and Elazar, Zvulun and Eskelinen, Eeva Liisa and Fourie, Bernard and Gözüaçık, Devrim and Hong, Wanjin and Jo, Eun Kyeong and Johansen, Terje and Juhász, Gábor and Kimchi, Adi and Ktistakis, Nicholas and Kroemer, Guido and Mizushima, Noboru and Münz, Christian and Reggiori, Fulvio and Rubinsztein, David and Ryan, Kevin and Schroder, Kate and Shen, Han Min and Simonsen, Anne and Tooze, Sharon A. and Vaccaro, Maria and Yoshimori, Tamotsu and Yu, Li and Zhang, Hong and Klionsky, Daniel J. (2019) Autophagy, inflammation, and metabolism (AIM) center in its second year. Autophagy, 15 (10). pp. 1829-1833. ISSN 1554-8627 (Print) 1554-8635 (Online)

E

Elitaş, Meltem and Yıldızhan, Yağmur and Islam, Monsur and Martinez-Duarte, Rodrigo and Özkazanç Ünsal, Didem (2019) Dielectrophoretic characterization and separation of monocytes and macrophages using 3D carbon-electrodes. Electrophoresis, 40 (2). pp. 315-321. ISSN 0173-0835 (Print) 1522-2683 (Online)

Erbil Bilir, Seçil and Gözüaçık, Devrim and Kutlu, Özlem (2019) Autophagy as a physiological response of the body to starvation. In: Preedy, Victor R. and Patel, Vinood B., (eds.) Handbook of Famine, Starvation, and Nutrient Deprivation: From Biology to Policy. Springer Cham, United Kingdom, pp. 2067-2081. ISBN 978-3-319-55386-3

Eroğlu, Emrah and Saeedi Saravi, Seyed Soheil and Sorrentino, Andrea and Steinhorn, Benjamin and Michel, Thomas (2019) Discordance between eNOS phosphorylation and activation revealed by multispectral imaging and chemogenetic methods. Proceedings of the National Academy of Sciences of the United States of America, 116 (40). pp. 20210-20217. ISSN 0027-8424 (Print) 1091-6490 (Online)

Esmaeilialiabadi, Danial and Avşar, Bihter and Yousefnezhad, Reza and Esmaeili Aliabadi, Edris (2019) Investigating global language networks using Google search queries. Expert Systems with Applications, 121 . pp. 66-77. ISSN 0957-4174 (Print) 1873-6793 (Online)

Eyüpoğlu, Alp Ertunga (2019) Investigating the role of coiled-coil domain containing 124 (CCDC124) in innate antiviral immune response. [Thesis]

G

Gomez-Coronado, Francisco and Almeida, Ana S. and Santamaria, Oscar and Çakmak, İsmail and Poblaciones, Maria J. (2019) Potential of advanced breeding lines of bread-making wheat to accumulate grain minerals (Ca, Fe, Mg and Zn) and low phytates under Mediterranean conditions. Journal of Agronomy and Crop Science, 205 (3). pp. 341-352. ISSN 0931-2250 (Print) 1439-037X (Online)

Gun, Gokhan and Imamoglu, Rahmi and Tatli, Ozge and Yürüm, Yuda and Tarik Baykal, Ahmet and Dinler-Doganay, Gizem (2019) Hyperthermophilic flavin reductase from Sulfolobus solfataricus P2: production and biochemical characterization. Biotechnology and Applied Biochemistry, 66 (6). pp. 915-923. ISSN 0885-4513 (Print) 1470-8744 (Online)

H

Hu, Jinchuan and Li, Wentao and Adebali, Ogün and Yang, Yanyan and Öztaş, Onur and Selby, Christopher P. and Sancar, Aziz (2019) Genome-wide mapping of nucleotide excision repair with XR-seq. Nature Protocols, 14 (1). pp. 248-282. ISSN 1754-2189 (Print) 1750-2799 (Online)

K

Kaleli, Hümeyra Nur (2019) Investigation of novel PKC targets in the regulation of autophagy. [Thesis]

Khan, Zaeema and Karamahmutoğlu, Hande and Elitaş, Meltem and Yüce, Meral and Budak, Hikmet (2019) Through the looking glass: real-time imaging in brachypodium roots and osmotic stress analysis. Plants, 8 (1). ISSN 2223-7747

Kocatürk, Nur Mehpare and Akkoç, Yunus and Kığ, Cenk and Bayraktar, Öznur and Gözüaçık, Devrim and Kutlu, Özlem (2019) Autophagy as a molecular target for cancer treatment. European Journal of Pharmaceutical Sciences, 134 . pp. 116-137. ISSN 0928-0987 (Print) 1879-0720 (Online)

Koch, Mirjam and Busse, Matthies and Naumann, Marcel and Jakli, Balint and Smit, Inga and Çakmak, İsmail and Hermans, Christian and Pawelzik, Elke (2019) Differential effects of varied potassium and magnesium nutrition on production and partitioning of photoassimilates in potato plants. Physiologia Plantarum, 166 (4). pp. 921-935. ISSN 0031-9317 (Peint) 1399-3054 (Online)

L

Li, Wentao and Liu, Wenjie and Kakoki, Ayano and Wang, Rujin and Adebali, Ogün and Jiang, Yuchao and Sancar, Aziz (2019) Differential damage and repair of anti-cancer drug cisplatin induced DNA-adducts across mouse organs. (Accepted)

Li, Wentao and Liu, Wenjie and Kakoki, Ayano and Wang, Rujin and Adebali, Ogün and Jiang, Yuchao and Sancar, Aziz (2019) Nucleotide excision repair capacity increases during differentiation of human embryonic carcinoma cells into neurons and muscle cells. Journal of Biological Chemistry, 294 (15). pp. 5914-5922. ISSN 0021-9258 (Print) 1083-351X (Online)

Liu, Gökşin and Altun, Ezgi and Ünal, Süleyman Mert and Atılgan, Canan and Sayers, Zehra (2019) Characterization and iron binding dynamics of haemophilus influenzae ferric binding protein. In: 63rd Annual Meeting of the Biophysical-Society, Baltimore, MD

M

Mayack, Christopher and Boff, Samuel (2019) LD50 values may be misleading predictors of neonicotinoid toxicity across different bee species [Neonikotinoidlerin zehir etkilerini belirlemede LD50 değerleri farklı an türleri için yanıltıcı bir öngösterge olabilir]. Uludağ Arıcılık Dergisi, 19 (1). pp. 19-33. ISSN 1303-0248

Mayack, Christopher and Phalen, Nicole and Carmichael, Kathleen and White, Helen K. and Hirche, Frank and Wang, Ying and Stangl, Gabriele I. and Amdam, Gro V. (2019) Appetite is correlated with octopamine and hemolymph sugar levels in forager honeybees. Journal of Comparative Physiology A: Neuroethology, Sensory, Neural and Behavioral Physiology, 205 (4). pp. 609-617. ISSN 0340-7594 (Print) 1432-1351 (Online)

N

Noğay, Liyne (2019) An interaction matrix of BTB domain-containing transcription factors. [Thesis]

O

Ozyerli-Goknar, Ezgi and Sur-Erdem, Ilknur and Seker, Fidan and Cingöz, Ahmet and Kayabolen, Alisan and Kahya-Yesil, Zeynep and Uyulur, Fırat and Gezen, Melike and Tolay, Nazife and Erman, Batu and Gönen, Mehmet and Dunford, James and Oppermann, Udo and Bagci-Onder, Tugba (2019) The fungal metabolite chaetocin is a sensitizer for pro-apoptotic therapies in glioblastoma. Cell Death and Disease, 10 . ISSN 2041-4889

P

Parlar, Ayhan and Sayitoğlu, Ece Canan and Özkazanç Ünsal, Didem and Georgoudaki, Anna-Maria and Pamukcu, Cevriye and Aras, Mertkaya and Josey, Benjamin J. and Chrobok, Michael and Branecki, Suzanne and Zahedimaram, Pegah and Ikromzoda, Lolai and Alıcı, Evren and Erman, Batu and Duru, Adil D. and Sütlü, Tolga (2019) Engineering antigen‐specific NK cell lines against the melanoma‐associated antigen tyrosinase via TCR gene transfer. European Journal of Immunology, 49 (8). pp. 1278-1290. ISSN 0014-2980 (Print) 1521-4141 (Online)

R

Rehman, Abdul and Farooq, Muhammad and Asif, Muhammad and Öztürk, Levent (2019) Supra-optimal growth temperature exacerbates adverse effects of low Zn supply in wheat. Journal of Plant Nutrition and Soil Science, 182 (4). pp. 656-666. ISSN 1436-8730 (Print) 1522-2624 (Online)

Rehman, Raheela (2019) Uptake, transport and seed deposition of zinc in wheat and maize under varied zinc and nitrogen supply. [Thesis]

Rehman, Raheela and Öztürk, Levent and Çakmak, İsmail (2019) Characterization of biofortified harvestplus wheat genotypes for root uptake, shoot translocation, foliar absorption, re-mobilization and seed deposition of Zn. In: 1st International Wheat Congress (IWC) 2019, Saskatoon, Canada

Rehman, Raheela and Öztürk, Levent and Çakmak, İsmail (2019) Studying differences in soil and foliar uptake and seed deposition of zinc in HarvestPlus-biofortified wheat genotypes grown in greenhouse conditions. In: International Conference on Wheat Diversity and Human Health, Istanbul, Turkey

S

Sakul, Arzu and Ozansoy, Mehmet and Elibol, Birsen and Ayla, Şule and Günal, Mehmet Yalçın and Yozgat, Yasemin and Başağa, Hüveyda and Şahin, Kazım and Kazancıoğlu, Rümeysa and Kılıç, Ulkan (2019) Squalene attenuates the oxidative stress and activates AKT/mTOR pathway against cisplatin-induced kidney damage in mice. Turkish Journal of Biology, 43 (3). pp. 179-188. ISSN 1300-0152 (Print) 1303-6092 (Online)

Sarıyar, Sanem (2019) Exploring nanobodies interrupting the interaction between p53 and MDM4. [Thesis]

Signorell, Coralie and Zimmermann, Michael B. and Çakmak, İsmail and Wegmueller, Rita and Zeder, Christophe and Hurrell, Richard and Açıksöz, Seher B. and Boy, Erick and Tay, Fabian and Frossard, Emmanuel and Moretti, Diego (2019) Zinc absorption from agronomically biofortified wheat is similar to post-harvest fortified wheat and is a substantial source of bioavailable zinc in humans. Journal of Nutrition, 149 (5). pp. 840-846. ISSN 0022-3166 (Print) 1541-6100 (Online)

T

Temel, Şehime Gülsün and Karakaş, Bahriye and Şeker, U. and Turkgenç, B. and Zorlu, O. and Sarıcaoğlu, H. and Oğur, C. and Kütük, O. and Kelsell, D. P. and Yakıcıer, M. C. (2019) A novel homozygous nonsense mutation in CAST associated with PLACK syndrome. Cell and Tissue Research, 378 (2). pp. 267-277. ISSN 0302-766X (Print) 1432-0878 (Online)

Timuçin, Ahmet Can and Başağa, Hüveyda and Kütük, Özgür (2019) Selective targeting of antiapoptotic BCL-2 proteins in cancer. Medicinal Research Reviews, 39 (1). pp. 146-175. ISSN 0198-6325 (Print) 1098-1128 (Online)

U

Usluer, Sinem (2019) Identification of immunological genes important for cytotoxicity. [Thesis]

Y

Yenenler, Aslı and Kurt, Hasan and Sezerman, Osman Uğur (2019) Enhancing enzymatic properties of endoglucanase I enzyme from trichoderma reesei via swapping from cellobiohydrolase I enzyme. Catalysts, 9 (2). ISSN 2073-4344

Yozgat, Yasemin (2019) p53-Regulated hexokinase 1b is a novel target for metabolic theraphy against non-small-cell lung cancer. [Thesis]

Z

Zou, Chunqin and Du, Yunfei and Rashid, A. and Ram, H. and Savaşlı, E. and Pieterse, P. J. and Ortiz-Monasterio, I. and Yazıcı, Mustafa Atilla and Kaur, C. and Mahmood, K. and Singh, S. and Le Roux, M. R. and Kuang, W. and Önder, O. and Kalaycı, M. and Çakmak, İsmail (2019) Simultaneous biofortification of wheat with zinc, iodine, selenium, and iron through foliar treatment of a micronutrient cocktail in six countries. Journal of Agricultural and Food Chemistry, 67 (29). pp. 8096-8106. ISSN 0021-8561 (Print) 1520-5118 (Online)

Zuvin, Merve and Kuruoğlu, Efe and Kaya, Veysel Oğulcan and Ünal, Özlem and Kutlu, Özlem and Yağcı Acar, Havva and Gözüaçık, Devrim and Koşar, Ali (2019) Magnetofection of green fluorescent protein encoding DNA-bearing polyethyleneimine-coated superparamagnetic iron oxide nanoparticles to human breast cancer cells. ACS Omega, 4 (7). pp. 12366-12374. ISSN 2470-1343

Ç

Çağırıcı, Halise Büşra (2019) Uncovering structural genomic contents of wheat. [Thesis]

Çelik, Elif (2019) A Systemic comparison of different chimeric antigen receptor (car) designs for retargeting of NK-92 cells against tumor antigens. [Thesis]

Ö

Önal, Gizem and Kutlu, Özlem and Özer, Ebru and Gözüaçık, Devrim and Karaduman, Ayşen and Dökmeci Emre, Serap (2019) Impairment of lipophagy by PNPLA1 mutations causes lipid droplet accumulation in primary fibroblasts of autosomal recessive congenital ichthyosis patients. Journal of Dermatological Science, 93 (1). pp. 50-57. ISSN 0923-1811 (Print) 1873-569X (Online)

Özbey, Arzu and Karimzadehkhouei, Mehrdad and Kocatürk, Nur Mehpare and Erbil Bilir, Seçil and Kutlu, Özlem and Gözüaçık, Devrim and Koşar, Ali (2019) Inertial focusing of cancer cell lines in curvilinear microchannels. Micro and Nano Engineering, 2 . pp. 53-63. ISSN 2590-0072

Öztürk, Deniz Gülfem (2019) Mechanisms of autophagy control through micrornas under cellular stress. [Thesis]

Öztürk, Deniz Gülfem and Koçak, Muhammed and Akçay, Arzu and Kınoğlu, Kubilay and Kara, Erdoğan and Büyük, Yalçın and Kazan, Hilal and Gözüaçık, Devrim (2019) MITF-MIR211 axis is a novel autophagy amplifier system during cellular stress. Autophagy, 15 (3). pp. 375-390. ISSN 1554-8627 (Print) 1554-8635 (Online)

Öztürk, Deniz Gülfem and Koçak, Muhammed and Gözüaçık, Devrim (2019) Cloning of autophagy-related MicroRNAs. In: Turksen, Kursad, (ed.) Autophagy in Differentiation and Tissue Maintenance: Methods and Protocols. Methods in Molecular Biology, 1854. Humana Press, New York, NY, pp. 131-146. ISBN 978-1-4939-9382-6 (Print) 978-1-4939-8748-1 (Online)

Öztürk, Levent (2019) Mineral beslenme (Bölüm 5). In: Taiz, Lincoln and Zeiger, Eduardo and Moller, Ian Max and Murphy, Angus, (eds.) Bitki Fizyolojisi ve Gelişimi. Palme Yayınevi, Ankara, Turkey, pp. 119-142. ISBN 978-605-282-283-8