Long-range structural regularities and collectivity of folded proteins

Atılgan, Canan and İnanç, İbrahim and Atılgan, Ali Rana (2010) Long-range structural regularities and collectivity of folded proteins. In: 2009 MRS Fall Meeting, Boston, MA

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Official URL: http://dx.doi.org/10.1557/PROC-1227-JJ03-06


Coarse-grained network models of proteins successfully predict equilibrium properties related to collective modes of motion. In this study, the network construction strategies and their systematic application to proteins are used to explain the role of network models in defining the collective properties of the system. The analysis is based on the radial distribution function, a newly defined angular distribution function and the spectral dimensions of a large set of globular proteins. Our analysis shows that after reaching a certain threshold for cut-off distance, network construction has negligible effect on the collective motions and the fluctuation patterns of the residues.

Item Type:Papers in Conference Proceedings
Additional Information:Paper number: 1227-JJ03-06
Subjects:Q Science > Q Science (General)
ID Code:15544
Deposited By:Ali Rana Atılgan
Deposited On:30 Nov 2010 17:15
Last Modified:29 Jul 2019 12:01

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