Items where Author is "Çetin, Ebru"

Article

Çetin, Ebru and Abdizadeh, Haleh and Atılgan, Ali Rana and Atılgan, Canan (2025) A thermodynamic cycle to predict the competitive inhibition outcomes of an evolving enzyme. Journal of Chemical Theory and Computation, 21 (9). pp. 4910-4920. ISSN 1549-9618 (Print) 1549-9626 (Online)

Güçlü, Tandaç Fürkan and Tayhan, Büşra and Çetin, Ebru and Atılgan, Ali Rana and Atılgan, Canan (2025) High throughput mutational scanning of a protein via alchemistry on a high-performance computing resource. Concurrency and Computation: Practice and Experience, 37 (3). ISSN 1532-0626 (Print) 1532-0634 (Online)

Çetin, Ebru and Güçlü, Tandaç Fürkan and Kantarcıoğlu, Işık and Gaszek, Ilona K. and Toprak, Erdal and Atılgan, Ali Rana and Dedeoglu, Burcu and Atılgan, Canan (2023) Kinetic barrier to enzyme inhibition is manipulated by dynamical local interactions in E. coli DHFR. Journal of Chemical Information and Modeling, 63 (15). pp. 4839-4849. ISSN 1549-9596 (Print) 1549-960X (Online)

Çetin, Ebru and Atılgan, Ali Rana and Atılgan, Canan (2022) DHFR mutants modulate their synchronized dynamics with the substrate by shifting hydrogen bond occupancies. Journal of Chemical Information and Modeling, 62 (24). pp. 6715-6726. ISSN 1549-9596 (Print) 1549-960X (Online)

Thesis

Çetin, Ebru (2023) Deciphering The Underlying Resistance-Conferring Mechanisms Of Dihydrofolate Reductase Using Energy Landscape Theory. [Thesis]