SPE approach for robust estimation of SIR model with limited and noisy data: the case for COVID-19

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Şenel, Kerem and Özdinç, Mesut and Öztürkcan, Didem Selcen (2020) SPE approach for robust estimation of SIR model with limited and noisy data: the case for COVID-19. Disaster Medicine and Public Health Preparedness . ISSN 1935-7893 (Print) 1938-744X (Online) Published Online First http://dx.doi.org/10.1017/dmp.2020.220

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Official URL: http://dx.doi.org/10.1017/dmp.2020.220


The SIR model and its variants are widely used to predict the progress of COVID-19 worldwide, despite their rather simplistic nature. Nevertheless, robust estimation of the SIR model presents a significant challenge, particularly with limited and possibly noisy data in the initial phase of the pandemic. K-means algorithm is used to perform a cluster analysis of the top ten countries with the highest number of COVID-19 cases, to observe if there are any significant differences among countries in terms of robustness. As a result of model variation tests, the robustness of parameter estimates is found to be particularly problematic in developing countries. The incompatibility of parameter estimates with the observed characteristics of COVID-19 is another potential problem. Hence, a series of research questions are visited. We propose a SPE (“Single Parameter Estimation”) approach to circumvent these potential problems if the basic SIR is the model of choice, and we check the robustness of this new approach by model variation and structured permutation tests. Dissemination of quality predictions is critical for policy and decision-makers in shedding light on the next phases of the pandemic.

Item Type:Article
Uncontrolled Keywords:COVID-19, epidemic models, SIR, robust estimation, coronavirus
Subjects:R Medicine > R Medicine (General)
ID Code:40127
Deposited By:Didem Selcen Öztürkcan
Deposited On:15 Sep 2020 18:40
Last Modified:15 Sep 2020 18:40

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