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Comparative metabolite profiling of drought stress in roots and leaves of seven Triticeae species

Ullah, Naimat and Yüce, Meral and Gökçe, Z. Neslihan Öztürk and Budak, Hikmet (2017) Comparative metabolite profiling of drought stress in roots and leaves of seven Triticeae species. BMC Genomics, 18 . ISSN 1471-2164

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Official URL: http://dx.doi.org/10.1186/s12864-017-4321-2

Abstract

Background: Drought is a lifestyle disease. Plant metabolomics has been exercised for understanding the fine-tuning of the potential pathways to surmount the adverse effects of drought stress. A broad spectrum of morphological and metabolic responses from seven Triticeae species including wild types with different drought tolerance/susceptibility level was investigated under control and water scarcity conditions. Results: Significant morphological parameters measured were root length, surface area, average root diameter and overall root development. Principal Component Analysis, Partial Least-Squares-Discriminant Analysis and Hierarchical Cluster Analysis were applied to the metabolomic data obtained by Gas Chromatography-Mass Spectrometry technique in order to determine the important metabolites of the drought tolerance across seven different Triticeae species. The metabolites showing significant accumulation under the drought stress were considered as the key metabolites and correlated with potential biochemical pathways, enzymes or gene locations for a better understanding of the tolerance mechanisms. In all tested species, 45 significantly active metabolites with possible roles in drought stress were identified. Twenty-one metabolites out of forty-five including sugars, amino acids, organic acids and low molecular weight compounds increased in both leaf and root samples of TR39477, IG132864 and Bolal under the drought stress, contrasting to TTD-22, Tosunbey, Ligustica and Meyeri samples. Three metabolites including succinate, aspartate and trehalose were selected for further genome analysis due to their increased levels in TR39477, IG132864, and Bolal upon drought stress treatment as well as their significant role in energy producing biochemical pathways. Conclusion: These results demonstrated that the genotypes with high drought tolerance skills, especially wild emmer wheat, have a great potential to be a genetic model system for experiments aiming to validate metabolomics-genomics networks.

Item Type:Article
Uncontrolled Keywords:Triticeae; Drought stress; Metabolome; Systems biology; Organic acids; Biochemical pathway; Plant genomics
Subjects:Q Science > Q Science (General)
ID Code:35648
Deposited By:Meral Yüce
Deposited On:11 Aug 2018 15:34
Last Modified:11 Aug 2018 15:34

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